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  5. AT1G75520

AT1G75520 (SRS5)


Aliases : SRS5

Description : SHI-related sequence 5


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G75520

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00161200 LRP1,... RNA biosynthesis.transcriptional activation.SRS... 0.04 OrthoFinder output from all 47 species
AT2G18120 SRS4 SHI-related sequence 4 0.06 OrthoFinder output from all 47 species
Adi_g061023 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26536 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035783 SHI SRS-type transcription factor & original description: CDS=1-2148 0.03 OrthoFinder output from all 47 species
Dcu_g40676 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02264 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13274 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21838 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31420 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.06 OrthoFinder output from all 47 species
LOC_Os01g72490.1 LRP1, LOC_Os01g72490 transcription factor (SRS) 0.09 OrthoFinder output from all 47 species
LOC_Os06g49830.1 SRS1, STY1,... transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
LOC_Os08g43410.1 SRS1, STY1,... transcription factor (SRS) 0.07 OrthoFinder output from all 47 species
LOC_Os09g36160.1 SRS1, STY1,... transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007215 SHI SRS-type transcription factor & original description: CDS=1-2160 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968 SHI SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Tin_g30774 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010227_P001 SRS1, STY1,... transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Zm00001e026854_P001 SHI, Zm00001e026854 transcription factor (SRS) 0.05 OrthoFinder output from all 47 species
Zm00001e028304_P001 LRP1, Zm00001e028304 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
Zm00001e031567_P001 LRP1, Zm00001e031567 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Zm00001e034798_P001 SRS1, STY1,... transcription factor (SRS) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0007389 pattern specification process RCA Interproscan
BP GO:0048438 floral whorl development RCA Interproscan
BP GO:0048439 flower morphogenesis RCA Interproscan
BP GO:0048467 gynoecium development IGI Interproscan
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Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
MF GO:0015301 obsolete anion:anion antiporter activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048479 style development IEP HCCA
BP GO:0048480 stigma development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!