AT1G72830 (HAP2C, NF-YA3, ATHAP2C)

Aliases : HAP2C, NF-YA3, ATHAP2C

Description : nuclear factor Y, subunit A3

Gene families : OG0000451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000451_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G72830

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00103p00144230	HAP2A, ATHAP2A,...	RNA biosynthesis.transcriptional activation.NF-Y...	0.03	OrthoFinder output from all 47 species
Ala_g14913	NF-YA9	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Als_g33762	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Aob_g07853	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Aob_g14888	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Cba_g17685	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Dac_g09023	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
LOC_Os03g29760.2	NF-YA6, LOC_Os03g29760	component NF-YA of NF-Y transcription factor complex	0.05	OrthoFinder output from all 47 species
LOC_Os07g41720.1	NF-YA8, LOC_Os07g41720	component NF-YA of NF-Y transcription factor complex	0.1	OrthoFinder output from all 47 species
Lfl_g07865	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
MA_60139g0010	NF-YA7	component NF-YA of NF-Y transcription factor complex	0.08	OrthoFinder output from all 47 species
Ore_g20033	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Ore_g44130	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Ppi_g06351	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.02	OrthoFinder output from all 47 species
Ppi_g40790	NF-YA7	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Sam_g17868	No alias	component *(NF-YA) of NF-Y transcription factor complex...	0.03	OrthoFinder output from all 47 species
Sam_g51682	No alias	component *(NF-YA) of NF-Y transcription factor complex...	0.01	OrthoFinder output from all 47 species
Solyc12g009050.3.1	NF-YA7, Solyc12g009050	component NF-YA of NF-Y transcription factor complex	0.06	OrthoFinder output from all 47 species
Zm00001e001966_P001	NF-YA6, Zm00001e001966	component NF-YA of NF-Y transcription factor complex	0.03	OrthoFinder output from all 47 species
Zm00001e003228_P001	NF-YA7, Zm00001e003228	component NF-YA of NF-Y transcription factor complex	0.02	OrthoFinder output from all 47 species
Zm00001e003259_P001	NF-YA10, Zm00001e003259	component NF-YA of NF-Y transcription factor complex	0.04	OrthoFinder output from all 47 species
Zm00001e005004_P001	NF-YA10, Zm00001e005004	component NF-YA of NF-Y transcription factor complex	0.05	OrthoFinder output from all 47 species
Zm00001e012396_P001	NF-YA10, Zm00001e012396	component NF-YA of NF-Y transcription factor complex	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IGI	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005667	transcription regulator complex	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
CC	GO:0016602	CCAAT-binding factor complex	ISS	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0090575	RNA polymerase II transcription regulator complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0005342	organic acid transmembrane transporter activity	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006664	glycolipid metabolic process	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0009247	glycolipid biosynthetic process	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009785	blue light signaling pathway	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0010262	somatic embryogenesis	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0016036	cellular response to phosphate starvation	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
BP	GO:0019374	galactolipid metabolic process	IEP	HCCA
BP	GO:0019375	galactolipid biosynthetic process	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0030522	intracellular receptor signaling pathway	IEP	HCCA
BP	GO:0031099	regeneration	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0046467	membrane lipid biosynthetic process	IEP	HCCA
MF	GO:0046943	carboxylic acid transmembrane transporter activity	IEP	HCCA
BP	GO:0048316	seed development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0071214	cellular response to abiotic stimulus	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071483	cellular response to blue light	IEP	HCCA
BP	GO:0104004	cellular response to environmental stimulus	IEP	HCCA
BP	GO:1903509	liposaccharide metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001289	NFYA	180	234

External Links

No external refs found!

AT1G72830 (HAP2C, NF-YA3, ATHAP2C)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation