AT1G71830 (SERK1, ATSERK1)

Aliases : SERK1, ATSERK1

Description : somatic embryogenesis receptor-like kinase 1

Gene families : OG0000331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000331_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G71830
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00184680	evm_27.TU.AmTr_v1...	Leucine-rich repeat protein 1 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
Als_g37002	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene36744.t1	Aspi01Gene36744	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0280.g062279	No alias	not classified & original description: CDS=101-778	0.03	OrthoFinder output from all 47 species
Cba_g38809	SERK1, ATSERK1	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g01289	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g20709	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g33360	SERK1, ATSERK1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g25848	ATSERK2, SERK2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g15539	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01000949001	No alias	Leucine-rich repeat protein 1 OS=Capsicum annuum	0.04	OrthoFinder output from all 47 species
Gb_01067	No alias	LRR receptor-like serine/threonine-protein kinase FLS2...	0.04	OrthoFinder output from all 47 species
LOC_Os04g38480.1	SERK1, ATSERK1,...	brassinosteroid co-receptor protein kinase (BAK)....	0.03	OrthoFinder output from all 47 species
LOC_Os08g07760.1	SERK1, ATSERK1,...	brassinosteroid co-receptor protein kinase (BAK)....	0.03	OrthoFinder output from all 47 species
LOC_Os11g31530.1	ATSERK2, SERK2,...	LRR receptor kinase SERK2 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species
MA_10430827g0010	No alias	LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica...	0.01	OrthoFinder output from all 47 species
MA_161337g0010	No alias	Leucine-rich repeat protein 1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_20217g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_92230g0010	No alias	Leucine-rich repeat protein 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp2g26220.1	No alias	LRR receptor-like serine/threonine-protein kinase GSO1...	0.03	OrthoFinder output from all 47 species
Mp3g10170.1	No alias	Probable LRR receptor-like serine/threonine-protein...	0.03	OrthoFinder output from all 47 species
Mp7g19460.1	No alias	Probable leucine-rich repeat receptor-like protein...	0.02	OrthoFinder output from all 47 species
Msp_g43770	SERK1, ATSERK1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g23615	SERK1, ATSERK1	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pnu_g24606	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g55206	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo418999	No alias	LRR receptor kinase BAK1 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
Solyc01g009810.3.1	ATSERK2, SERK2,...	Leucine-rich repeat protein 1 OS=Capsicum annuum...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	None	Extended
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IDA	Interproscan
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0005102	signaling receptor binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006468	protein phosphorylation	IDA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007030	Golgi organization	IGI	Interproscan
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009556	microsporogenesis	IMP	Interproscan
BP	GO:0009556	microsporogenesis	IGI	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009742	brassinosteroid mediated signaling pathway	IMP	Interproscan
BP	GO:0009742	brassinosteroid mediated signaling pathway	IGI	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009793	embryo development ending in seed dormancy	RCA	Interproscan
BP	GO:0009838	abscission	None	Extended
BP	GO:0009880	embryonic pattern specification	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010072	primary shoot apical meristem specification	RCA	Interproscan
BP	GO:0010152	pollen maturation	IMP	Interproscan
BP	GO:0010227	floral organ abscission	IGI	Interproscan
BP	GO:0010228	vegetative to reproductive phase transition of meristem	RCA	Interproscan
BP	GO:0010431	seed maturation	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016301	kinase activity	ISS	Interproscan
BP	GO:0016310	phosphorylation	RCA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0019199	transmembrane receptor protein kinase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0033612	receptor serine/threonine kinase binding	IPI	Interproscan
BP	GO:0034293	sexual sporulation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
BP	GO:0042742	defense response to bacterium	RCA	Interproscan
MF	GO:0042802	identical protein binding	IPI	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043401	steroid hormone mediated signaling pathway	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043934	sporulation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0045595	regulation of cell differentiation	RCA	Interproscan
BP	GO:0046777	protein autophosphorylation	TAS	Interproscan
BP	GO:0048236	plant-type sporogenesis	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051301	cell division	RCA	Interproscan
BP	GO:0051321	meiotic cell cycle	None	Extended
BP	GO:0051707	response to other organism	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090421	embryonic meristem initiation	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000323	lytic vacuole	IEP	HCCA
CC	GO:0000325	plant-type vacuole	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004805	trehalose-phosphatase activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005819	spindle	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008506	sucrose:proton symporter activity	IEP	HCCA
MF	GO:0008515	sucrose transmembrane transporter activity	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0009669	sucrose:monoatomic cation symporter activity	IEP	HCCA
BP	GO:0009687	abscisic acid metabolic process	IEP	HCCA
BP	GO:0009688	abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
CC	GO:0010282	senescence-associated vacuole	IEP	HCCA
BP	GO:0010345	suberin biosynthetic process	IEP	HCCA
MF	GO:0010436	carotenoid dioxygenase activity	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015154	disaccharide transmembrane transporter activity	IEP	HCCA
MF	GO:0015157	oligosaccharide transmembrane transporter activity	IEP	HCCA
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0019203	carbohydrate phosphatase activity	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
BP	GO:0043288	apocarotenoid metabolic process	IEP	HCCA
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
MF	GO:0050062	long-chain-fatty-acyl-CoA reductase activity	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1902644	tertiary alcohol metabolic process	IEP	HCCA
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	HCCA
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000719	Prot_kinase_dom	303	574
IPR013210	LRR_N_plant-typ	27	66

External Links

No external refs found!

AT1G71830 (SERK1, ATSERK1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation