AT1G71130

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G71130

Target	Alias	Description	ECC score	Gene Family Method
AT1G44830	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
AT4G13620	No alias	Integrase-type DNA-binding superfamily protein	0.01	OrthoFinder output from all 47 species
AT5G52020	No alias	Integrase-type DNA-binding superfamily protein	0.05	OrthoFinder output from all 47 species
Aev_g17007	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g14888	No alias	subgroup ERF-X transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g37207	DREB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g38397	RAP2.1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene02794.t1	RAP2.11, Aspi01Gene02794	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene03223.t1	DEAR2, Aspi01Gene03223	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene08500.t1	ATERF3, ERF3,...	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene34446.t1	Aspi01Gene34446	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene35032.t1	Rap2.6L, Aspi01Gene35032	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene41926.t1	RAP2.11, Aspi01Gene41926	transcription factor *(ERN1) & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene43376.t1	DREB26, Aspi01Gene43376	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene43377.t1	DREB26, Aspi01Gene43377	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene47288.t1	Aspi01Gene47288	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene58502.t1	Aspi01Gene58502	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Aspi01Gene61391.t1	DEAR3, Aspi01Gene61391	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene70906.t1	Aspi01Gene70906	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Azfi_s0013.g013243	No alias	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Azfi_s0143.g051439	No alias	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Azfi_s0154.g053565	RAP2.6	subgroup ERF-X transcription factor & original...	0.01	OrthoFinder output from all 47 species
Azfi_s0233.g059392	DEAR3	not classified & original description: CDS=1-1401	0.01	OrthoFinder output from all 47 species
Ceric.05G076100.1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ceric.13G053900.1	Ceric.13G053900	subgroup ERF-IX transcription factor & original...	0.01	OrthoFinder output from all 47 species
Ceric.13G080300.1	Ceric.13G080300	subgroup ERF-V transcription factor & original...	0.01	OrthoFinder output from all 47 species
Dac_g15023	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dac_g17233	No alias	subgroup ERF-III transcription factor & original...	0.01	OrthoFinder output from all 47 species
Dac_g38440	RAP2.11	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g40468	No alias	subgroup ERF-V transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g19756	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dde_g28204	DREB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03840	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g27094	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g27343	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g28749	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g29251	No alias	subgroup ERF-I transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01022277001	ABR1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01036388001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
Gb_02790	No alias	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Gb_03645	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.01	OrthoFinder output from all 47 species
LOC_Os02g10760.1	WIN1, SHN1,...	transcription factor (ERF). SHN-type cutin and suberin...	0.01	OrthoFinder output from all 47 species
LOC_Os02g45420.1	LOC_Os02g45420	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
LOC_Os03g22170.1	HRE2, LOC_Os03g22170	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
LOC_Os04g32620.1	Rap2.6L, LOC_Os04g32620	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os04g44670.1	LOC_Os04g44670	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
LOC_Os05g49700.1	LOC_Os05g49700	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
LOC_Os07g42510.1	RAP2.12, LOC_Os07g42510	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g39810.1	LOC_Os09g39810	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Lfl_g40989	No alias	subgroup ERF-V transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10427743g0020	TMO3, CRF2	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_54341g0010	WIN1, SHN1	transcription factor (ERF). SHN-type cutin and suberin...	0.01	OrthoFinder output from all 47 species
Msp_g20272	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Msp_g43178	RAP2.9, DEAR5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g47937	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011575	DEAR1, CEJ1, ATERF#011	not classified & original description: CDS=1-717	0.04	OrthoFinder output from all 47 species
Solyc01g091760.3.1	RAP2.11, Solyc01g091760	transcription factor (ERF). transcription factor (ERN1)	0.08	OrthoFinder output from all 47 species
Solyc02g077360.1.1	Solyc02g077360	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Solyc08g007230.3.1	ERF-1, ATERF-1,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Solyc10g078610.1.1	RAP2.11, Solyc10g078610	transcription factor (ERF). transcription factor (ERN1)	0.03	OrthoFinder output from all 47 species
Spa_g01688	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006643	membrane lipid metabolic process	None	Extended
BP	GO:0006664	glycolipid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009247	glycolipid biosynthetic process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0016036	cellular response to phosphate starvation	RCA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019374	galactolipid metabolic process	None	Extended
BP	GO:0019375	galactolipid biosynthetic process	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046467	membrane lipid biosynthetic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903509	liposaccharide metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	78	132

External Links

No external refs found!

AT1G71130

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation