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AT1G70170 (MMP)


Aliases : MMP

Description : matrix metalloproteinase


Gene families : OG0002614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G70170
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00201730 MMP,... Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
AMTR_s00106p00141160 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
AT1G24140 No alias Matrixin family protein 0.03 OrthoFinder output from all 47 species
AT1G59970 No alias Matrixin family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01018206001 No alias Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
GSVIVT01032544001 No alias Protein degradation.peptidase families.metallopeptidase... 0.03 OrthoFinder output from all 47 species
GSVIVT01032545001 MMP Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
GSVIVT01032546001 MMP Protein degradation.peptidase families.metallopeptidase... 0.05 OrthoFinder output from all 47 species
GSVIVT01032549001 MMP Protein degradation.peptidase families.metallopeptidase... 0.04 OrthoFinder output from all 47 species
LOC_Os02g50730.1 MMP, LOC_Os02g50730 Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
LOC_Os06g13180.1 MMP, LOC_Os06g13180 Matrixin-type metalloprotease 0.05 OrthoFinder output from all 47 species
Pir_g41391 No alias EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Smo110370 No alias Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder output from all 47 species
Solyc04g005050.1.1 Solyc04g005050 Matrixin-type metalloprotease 0.03 OrthoFinder output from all 47 species
Spa_g49383 MMP EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Zm00001e036059_P001 MMP, Zm00001e036059 Matrixin-type metalloprotease 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0006508 proteolysis ISS Interproscan
CC GO:0031225 obsolete anchored component of membrane TAS Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008553 P-type proton-exporting transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR001818 Pept_M10_metallopeptidase 164 324
IPR002477 Peptidoglycan-bd-like 61 113
No external refs found!