AT1G68480 (JAG)

Aliases : JAG

Description : C2H2 and C2HC zinc fingers superfamily protein

Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G68480

Target	Alias	Description	ECC score	Gene Family Method
Aev_g00990	ZFP3	C2H2 subclass ZFP transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aev_g07088	No alias	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g00894	ZFP3	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene03058.t1	ZFP10, ATZFP10,...	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene03060.t1	ZFP10, ATZFP10,...	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene56786.t1	Aspi01Gene56786	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0008.g011541	ZFP10, ATZFP10	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0034.g025408	RAB, RBE	C2H2 subclass ZFP transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.29G024000.1	Ceric.29G024000	C2H2 subclass ZFP transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dde_g22779	No alias	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g30781	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011868001	No alias	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.02	OrthoFinder output from all 47 species
LOC_Os03g11680.1	ZFP8, LOC_Os03g11680	C2H2 zinc finger transcription factor	0.05	OrthoFinder output from all 47 species
Nbi_g11810	No alias	C2H2 subclass ZFP transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g00352	ZFP1, ATZFP1	C2H2 subclass ZFP transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g30209	ZFP10, ATZFP10	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ore_g34996	No alias	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g19015	No alias	C2H2 subclass ZFP transcription factor & original...	0.02	OrthoFinder output from all 47 species
Smo440375	No alias	No description available	0.03	OrthoFinder output from all 47 species
Solyc03g117070.1.1	Solyc03g117070	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Solyc10g078970.1.1	GIS2, Solyc10g078970	C2H2 zinc finger transcription factor	0.11	OrthoFinder output from all 47 species
Zm00001e008019_P001	ATZFP2, ZFP2,...	C2H2 zinc finger transcription factor	0.08	OrthoFinder output from all 47 species
Zm00001e017009_P001	Zm00001e017009	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e025728_P002	JAG, Zm00001e025728	Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp....	0.06	OrthoFinder output from all 47 species
Zm00001e034219_P001	ATZFP2, ZFP2,...	C2H2 zinc finger transcription factor	0.09	OrthoFinder output from all 47 species
Zm00001e034220_P001	ATZFP2, ZFP2,...	C2H2 zinc finger transcription factor	0.09	OrthoFinder output from all 47 species
Zm00001e034221_P001	ATZFP2, ZFP2,...	C2H2 zinc finger transcription factor	0.09	OrthoFinder output from all 47 species
Zm00001e040612_P001	ZFP11, ATZFP11,...	C2H2 zinc finger transcription factor	0.09	OrthoFinder output from all 47 species
Zm00001e040940_P001	ATZFP2, ZFP2,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	ISS	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009908	flower development	IMP	Interproscan
BP	GO:0009965	leaf morphogenesis	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010093	specification of floral organ identity	IMP	Interproscan
BP	GO:0010093	specification of floral organ identity	RCA	Interproscan
BP	GO:0010158	abaxial cell fate specification	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048440	carpel development	IGI	Interproscan
BP	GO:0048440	carpel development	RCA	Interproscan
BP	GO:0048443	stamen development	IGI	Interproscan
BP	GO:0048449	floral organ formation	None	Extended
BP	GO:0048451	petal formation	RCA	Interproscan
BP	GO:0048453	sepal formation	RCA	Interproscan
BP	GO:0048507	meristem development	RCA	Interproscan
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048653	anther development	IGI	Interproscan
BP	GO:0048731	system development	None	Extended
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
BP	GO:0090701	specification of plant organ identity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:1905393	plant organ formation	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003725	double-stranded RNA binding	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009554	megasporogenesis	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009850	auxin metabolic process	IEP	HCCA
BP	GO:0009851	auxin biosynthetic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0010229	inflorescence development	IEP	HCCA
BP	GO:0010267	ta-siRNA processing	IEP	HCCA
BP	GO:0010321	regulation of vegetative phase change	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0030422	siRNA processing	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0035196	miRNA processing	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0051607	defense response to virus	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0070918	regulatory ncRNA processing	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0140546	defense response to symbiont	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000024	regulation of leaf development	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G68480 (JAG)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation