AT1G66480

Description : plastid movement impaired 2

Gene families : OG0001373 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001373_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G66480

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00113p00026730	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT2G01340	At17.1	At17.1; FUNCTIONS IN: molecular_function unknown;...	0.03	OrthoFinder output from all 47 species
AT5G03890	No alias	unknown protein; INVOLVED IN: N-terminal protein...	0.03	OrthoFinder output from all 47 species
Aev_g12298	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g12299	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g19705	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g14591	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12604	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g30811	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011766001	At17.1	Uncharacterized protein At1g66480 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01027432001	No alias	No description available	0.05	OrthoFinder output from all 47 species
Gb_39534	No alias	Uncharacterized protein At1g66480 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Gb_39648	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os06g14780.1	LOC_Os06g14780	Uncharacterized protein At1g66480 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os09g23780.1	LOC_Os09g23780	Uncharacterized protein At1g66480 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Lfl_g25690	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_248791g0010	At17.1	Uncharacterized protein At1g66480 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_356354g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_6869016g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Pir_g39267	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc05g008210.4.1	At17.1, Solyc05g008210	Uncharacterized protein At1g66480 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc05g008220.4.1	At17.1, Solyc05g008220	Uncharacterized protein At1g66480 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc10g005020.3.1	Solyc10g005020	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009692	ethylene metabolic process	None	Extended
BP	GO:0009693	ethylene biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0043449	cellular alkene metabolic process	None	Extended
BP	GO:0043450	alkene biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009751	response to salicylic acid	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025322	PADRE_dom	1	91

External Links

No external refs found!

AT1G66480

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation