AT1G58100

Description : TCP family transcription factor

Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G58100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00171910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.TCP...	0.04	OrthoFinder output from all 47 species
Adi_g021930	AtTCP14, TCP14	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g040816	No alias	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058016	AtTCP14, TCP14	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g074351	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g06733	No alias	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene56690.t1	Aspi01Gene56690	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g01691	No alias	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g07139	No alias	TCP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Solyc06g070900.3.1	AtTCP14, TCP14,...	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species
Solyc08g080150.1.1	Solyc08g080150	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species
Tin_g01170	No alias	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e024509_P001	Zm00001e024509	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species
Zm00001e039492_P001	Zm00001e039492	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005249	voltage-gated potassium channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005267	potassium channel activity	IEP	HCCA
MF	GO:0005351	carbohydrate:proton symporter activity	IEP	HCCA
MF	GO:0005402	carbohydrate:monoatomic cation symporter activity	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
CC	GO:0008076	voltage-gated potassium channel complex	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015144	carbohydrate transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015293	symporter activity	IEP	HCCA
MF	GO:0015294	solute:monoatomic cation symporter activity	IEP	HCCA
MF	GO:0015295	solute:proton symporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0022843	voltage-gated monoatomic cation channel activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
CC	GO:0034702	ion channel complex	IEP	HCCA
CC	GO:0034703	cation channel complex	IEP	HCCA
CC	GO:0034705	potassium channel complex	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR017887	TF_TCP_subgr	59	220

External Links

No external refs found!

AT1G58100

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation