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AT1G55680


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0001520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55680
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Als_g37524 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g43173 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053571 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g13163 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Dac_g09275 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dac_g13094 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01014841001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g26870.1 LOC_Os03g26870 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g098690.2.1 Solyc12g098690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g47564 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0002218 activation of innate immune response IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002253 activation of immune response IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002684 positive regulation of immune system process IEP HCCA
BP GO:0002833 positive regulation of response to biotic stimulus IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005275 amine transmembrane transporter activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010052 guard cell differentiation IEP HCCA
BP GO:0010071 root meristem specification IEP HCCA
BP GO:0010078 maintenance of root meristem identity IEP HCCA
BP GO:0010099 regulation of photomorphogenesis IEP HCCA
MF GO:0010178 IAA-amino acid conjugate hydrolase activity IEP HCCA
MF GO:0010179 IAA-Ala conjugate hydrolase activity IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016032 viral process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031349 positive regulation of defense response IEP HCCA
BP GO:0032103 positive regulation of response to external stimulus IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044001 migration in host IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0045089 positive regulation of innate immune response IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046739 transport of virus in multicellular host IEP HCCA
BP GO:0046740 transport of virus in host, cell to cell IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050778 positive regulation of immune response IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
BP GO:0051782 negative regulation of cell division IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0080022 primary root development IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:2000030 regulation of response to red or far red light IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 307 345
No external refs found!