1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G55570

AT1G55570 (sks12)


Aliases : sks12

Description : SKU5 similar 12


Gene families : OG0000411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000411_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G55570

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00093220 sks11,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 OrthoFinder output from all 47 species
AMTR_s00159p00040990 sks11,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 OrthoFinder output from all 47 species
AT1G55560 sks14 SKU5 similar 14 0.04 OrthoFinder output from all 47 species
AT3G13400 sks13 SKU5 similar 13 0.06 OrthoFinder output from all 47 species
Adi_g020753 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Adi_g059902 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aev_g19338 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Als_g27093 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Als_g48778 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Als_g52559 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.01 OrthoFinder output from all 47 species
Aop_g12346 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aop_g25152 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11234.t1 sks5, Aspi01Gene11234 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Cba_g12747 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Cba_g56528 sks8 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dac_g31878 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Dde_g07912 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ehy_g06013 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Ehy_g06856 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Gb_05398 sks5 L-ascorbate oxidase homolog OS=Brassica napus... 0.02 OrthoFinder output from all 47 species
LOC_Os01g60080.1 sks11, LOC_Os01g60080 L-ascorbate oxidase homolog OS=Brassica napus... 0.08 OrthoFinder output from all 47 species
LOC_Os05g40740.3 sks11, LOC_Os05g40740 L-ascorbate oxidase homolog OS=Brassica napus... 0.08 OrthoFinder output from all 47 species
LOC_Os06g01490.1 SKU5, LOC_Os06g01490 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g02810.1 sks17, LOC_Os07g02810 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Len_g00683 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Len_g41387 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Len_g45890 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Lfl_g25260 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
MA_110832g0010 SKU5 Monocopper oxidase-like protein SKU5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g05618 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Msp_g11436 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Nbi_g05449 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Nbi_g06735 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Nbi_g06759 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g13020 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g33219 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ppi_g56836 SKU5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Smo410532 sks4 Monocopper oxidase-like protein SKU5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g005510.3.1 sks11, Solyc01g005510 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.07 OrthoFinder output from all 47 species
Solyc01g056310.3.1 sks12, Solyc01g056310 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.09 OrthoFinder output from all 47 species
Solyc02g090360.3.1 sks17, Solyc02g090360 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Solyc03g063150.3.1 sks12, Solyc03g063150 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.07 OrthoFinder output from all 47 species
Solyc04g081520.3.1 sks18, Solyc04g081520 Monocopper oxidase-like protein SKS1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g055710.3.1 sks12, Solyc05g055710 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
Spa_g24882 sks4 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Spa_g56472 sks5 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Tin_g36245 sks4 EC_1.10 oxidoreductase acTing on diphenol or related... 0.02 OrthoFinder output from all 47 species
Zm00001e019468_P001 sks11, Zm00001e019468 L-ascorbate oxidase homolog OS=Brassica napus... 0.08 OrthoFinder output from all 47 species
Zm00001e027313_P002 sks11, Zm00001e027313 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Zm00001e028870_P001 sks11, Zm00001e028870 L-ascorbate oxidase homolog OS=Brassica napus... 0.09 OrthoFinder output from all 47 species
Zm00001e031971_P001 sks11, Zm00001e031971 L-ascorbate oxidase homolog OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0006828 manganese ion transport IEP HCCA
BP GO:0007204 positive regulation of cytosolic calcium ion concentration IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
BP GO:0015691 cadmium ion transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
CC GO:0016324 apical plasma membrane IEP HCCA
BP GO:0017157 regulation of exocytosis IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
CC GO:0042995 cell projection IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046910 pectinesterase inhibitor activity IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0050829 defense response to Gram-negative bacterium IEP HCCA
BP GO:0050848 regulation of calcium-mediated signaling IEP HCCA
BP GO:0050850 positive regulation of calcium-mediated signaling IEP HCCA
BP GO:0051046 regulation of secretion IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051648 vesicle localization IEP HCCA
BP GO:0051650 establishment of vesicle localization IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0060627 regulation of vesicle-mediated transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0090406 pollen tube IEP HCCA
CC GO:0098590 plasma membrane region IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0120025 plasma membrane bounded cell projection IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
BP GO:1902533 positive regulation of intracellular signal transduction IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1903530 regulation of secretion by cell IEP HCCA
InterPro domains Description Start Stop
IPR011707 Cu-oxidase_N 35 148
IPR001117 Cu-oxidase_2nd 160 302
IPR011706 Cu-oxidase_C 391 524
No external refs found!