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  5. AT1G53370

AT1G53370


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53370

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G26510 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT1G30920 No alias F-box family protein 0.05 OrthoFinder output from all 47 species
AT1G30930 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT1G31090 No alias F-box family protein 0.07 OrthoFinder output from all 47 species
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.16 OrthoFinder output from all 47 species
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.09 OrthoFinder output from all 47 species
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.13 OrthoFinder output from all 47 species
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.07 OrthoFinder output from all 47 species
AT1G46840 No alias F-box family protein 0.13 OrthoFinder output from all 47 species
AT1G46912 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT1G47350 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT1G47730 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G47765 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT1G47800 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G47810 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.08 OrthoFinder output from all 47 species
AT1G53790 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.11 OrthoFinder output from all 47 species
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G59690 No alias F-box associated ubiquitination effector family protein 0.07 OrthoFinder output from all 47 species
AT1G61060 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT2G02890 No alias F-box family protein 0.06 OrthoFinder output from all 47 species
AT2G13630 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT2G16220 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT2G40910 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT3G10240 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT3G47140 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G49450 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT3G52330 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT3G57580 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT5G15670 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G18160 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G22791 No alias F-box family protein 0.08 OrthoFinder output from all 47 species
AT5G44220 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.1 OrthoFinder output from all 47 species
AT5G50220 No alias F-box family protein 0.04 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.13 OrthoFinder output from all 47 species
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G62660 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 203 316
IPR001810 F-box_dom 25 65
No external refs found!