AT1G53300 (TTL1)

Aliases : TTL1

Description : tetratricopetide-repeat thioredoxin-like 1

Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G53300

Target	Alias	Description	ECC score	Gene Family Method
Adi_g081368	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g06190	TTL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g16305	TTL1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g40020	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08772	TTL1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene21591.t1	TTL1, Aspi01Gene21591	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene34061.t1	TTL1, Aspi01Gene34061	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0413.g068595	TTL1	not classified & original description: CDS=1-2694	0.04	OrthoFinder output from all 47 species
Cba_g27581	TTL1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.02G063800.1	TTL1, Ceric.02G063800	not classified & original description: pacid=50585538...	0.04	OrthoFinder output from all 47 species
Dac_g01798	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g14546	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01014216001	TTL1	TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana	0.07	OrthoFinder output from all 47 species
GSVIVT01020699001	TTL3, VIT	Inactive TPR repeat-containing thioredoxin TTL3...	0.08	OrthoFinder output from all 47 species
LOC_Os01g42960.1	TTL1, LOC_Os01g42960	scaffold protein (TTL) of brassinosteroid signalling	0.04	OrthoFinder output from all 47 species
Lfl_g06698	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426265g0010	TTL1	scaffold protein (TTL) of brassinosteroid signalling	0.02	OrthoFinder output from all 47 species
Mp6g04200.1	TTL1	TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Msp_g13725	TTL1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g07534	TTL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g09362	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g17923	TTL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01359	TTL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g17078	TTL1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sam_g24452	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g062580.4.1	TTL1, Solyc07g062580	scaffold protein (TTL) of brassinosteroid signalling	0.08	OrthoFinder output from all 47 species
Spa_g04571	TTL1	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g16173	TTL1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g10854	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g11229	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g14806	TTL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e020701_P001	TTL1, Zm00001e020701	scaffold protein (TTL) of brassinosteroid signalling	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IMP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009787	regulation of abscisic acid-activated signaling pathway	None	Extended
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IMP	Interproscan
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0009967	positive regulation of signal transduction	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
BP	GO:0010647	positive regulation of cell communication	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0023056	positive regulation of signaling	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901419	regulation of response to alcohol	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1905957	regulation of cellular response to alcohol	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006084	acetyl-CoA metabolic process	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006637	acyl-CoA metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010026	trichome differentiation	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
BP	GO:0010091	trichome branching	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0016926	protein desumoylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
MF	GO:0018454	acetoacetyl-CoA reductase activity	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0030148	sphingolipid biosynthetic process	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0035383	thioester metabolic process	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0042761	very long-chain fatty acid biosynthetic process	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
MF	GO:0045703	ketoreductase activity	IEP	HCCA
BP	GO:0046467	membrane lipid biosynthetic process	IEP	HCCA
BP	GO:0046519	sphingoid metabolic process	IEP	HCCA
BP	GO:0046520	sphingoid biosynthetic process	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
CC	GO:0070971	endoplasmic reticulum exit site	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013766	Thioredoxin_domain	605	687
IPR001440	TPR_1	499	532
IPR019734	TPR_repeat	420	451

External Links

No external refs found!

AT1G53300 (TTL1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation