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  5. AT1G52830

AT1G52830 (SHY1, IAA6)


Aliases : SHY1, IAA6

Description : indole-3-acetic acid 6


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G52830
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00019410 IAA4, ATAUX2-11,... Auxin-induced protein 22D OS=Vigna radiata var. radiata 0.03 OrthoFinder output from all 47 species
AT1G04250 AXR3, IAA17 AUX/IAA transcriptional regulator family protein 0.04 OrthoFinder output from all 47 species
AT1G04550 IAA12, BDL AUX/IAA transcriptional regulator family protein 0.04 OrthoFinder output from all 47 species
AT1G15580 ATAUX2-27, AUX2-27, IAA5 indole-3-acetic acid inducible 5 0.05 OrthoFinder output from all 47 species
AT1G80390 IAA15 indole-3-acetic acid inducible 15 0.04 OrthoFinder output from all 47 species
AT3G15540 MSG2, IAA19 indole-3-acetic acid inducible 19 0.06 OrthoFinder output from all 47 species
AT3G16500 PAP1, IAA26 phytochrome-associated protein 1 0.05 OrthoFinder output from all 47 species
AT4G14560 IAA1, AXR5 indole-3-acetic acid inducible 0.04 OrthoFinder output from all 47 species
AT4G28640 IAA11 indole-3-acetic acid inducible 11 0.04 OrthoFinder output from all 47 species
AT4G32280 IAA29 indole-3-acetic acid inducible 29 0.03 OrthoFinder output from all 47 species
Adi_g015769 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g50786 SLR, IAA14 transcriptional repressor *(IAA/AUX) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G078200.1 IAA4, ATAUX2-11,... transcriptional repressor *(IAA/AUX) & original... 0.03 OrthoFinder output from all 47 species
Ceric.18G047900.1 IAA8, Ceric.18G047900 transcriptional repressor *(IAA/AUX) & original... 0.03 OrthoFinder output from all 47 species
Dde_g19267 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g38180 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08365 IAA11 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000720001 IAA4, ATAUX2-11 Auxin-induced protein 22D OS=Vigna radiata var. radiata 0.03 OrthoFinder output from all 47 species
GSVIVT01000721001 IAA16 Auxin-responsive protein IAA16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01015449001 AXR3, IAA17 Auxin-responsive protein IAA17 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01017158001 MSG2, IAA19 Auxin-induced protein AUX22 OS=Glycine max 0.04 OrthoFinder output from all 47 species
LOC_Os03g43400.1 IAA16, LOC_Os03g43400 Auxin-responsive protein IAA11 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os06g39590.1 AXR3, IAA17,... Auxin-responsive protein IAA23 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Ore_g18021 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g33082 IAA11 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g36977 IAA12, BDL transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11175 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18437 No alias transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35361 No alias transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05340 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g22326 IAA4, ATAUX2-11 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005634_P001 IAA16, Zm00001e005634 Auxin-responsive protein IAA13 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e012059_P002 IAA16, Zm00001e012059 Auxin-responsive protein IAA13 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Zm00001e032955_P001 IAA4, ATAUX2-11,... Auxin-responsive protein IAA24 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009704 de-etiolation IMP Interproscan
BP GO:0009733 response to auxin IMP Interproscan
BP GO:0009733 response to auxin IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 31 184
No external refs found!