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AT1G52460


Description : alpha/beta-Hydrolases superfamily protein


Gene families : OG0001188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001188_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G52460
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g09540.1 LOC_Os04g09540 Probable carboxylesterase Os04g0669500 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Solyc06g067950.3.1 Solyc06g067950 Probable carboxylesterase Os04g0669500 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006278 RNA-templated DNA biosynthetic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0044030 regulation of DNA methylation IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!