AT1G48410 (AGO1)


Aliases : AGO1

Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G48410

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00203090 AGO4, OCP11,... Chromatin organisation.DNA methylation.canonical... 0.06 OrthoFinder output from all 47 species
AT5G21030 No alias PAZ domain-containing protein / piwi domain-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g016083 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017777 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061053 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088499 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33064 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Als_g06375 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17789 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g41650 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58865 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Aob_g04459 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29180.t1 AGO1, Aspi01Gene29180 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Azfi_s0095.g043652 AGO1 not classified & original description: CDS=139-2811 0.03 OrthoFinder output from all 47 species
Cba_g16425 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Cba_g25204 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34642 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G056900.1 AGO1, Ceric.28G056900 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ceric.30G040900.1 AGO4, OCP11,... siRNA-integrating factor *(AGO) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g02891 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18764 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Dde_g48495 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06133 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Ehy_g18181 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
GSVIVT01025868001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.04 OrthoFinder output from all 47 species
GSVIVT01029383001 AGO1 Chromatin organisation.DNA methylation.canonical... 0.06 OrthoFinder output from all 47 species
GSVIVT01037488001 AGO4, OCP11 Chromatin organisation.DNA methylation.canonical... 0.06 OrthoFinder output from all 47 species
Gb_34718 PNH, AGO10, ZLL Protein argonaute 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g58490.1 AGO1, LOC_Os02g58490 RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
LOC_Os04g06770.2 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.06 OrthoFinder output from all 47 species
LOC_Os04g47870.1 AGO1, LOC_Os04g47870 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
LOC_Os06g39640.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
LOC_Os07g09020.1 AGO5, LOC_Os07g09020 Protein argonaute 14 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Len_g08293 PNH, AGO10, ZLL not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g35246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40869 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10427420g0010 AGO1 Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10429131g0010 AGO1 Protein argonaute 1B OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_118377g0010 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
MA_18547g0010 AGO1 Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Mp1g18110.1 AGO1 RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
Msp_g13472 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Ore_g10399 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17487 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Pnu_g23416 PNH, AGO10, ZLL not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08413 No alias miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Solyc01g008960.3.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.05 OrthoFinder output from all 47 species
Solyc03g098280.4.1 AGO1, Solyc03g098280 RIS-Complex miRNA recruiting factor (AGO1) 0.05 OrthoFinder output from all 47 species
Solyc07g049500.3.1 AGO6, Solyc07g049500 siRNA-integrating factor (AGO) 0.03 OrthoFinder output from all 47 species
Spa_g09278 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38063 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e017367_P001 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.03 OrthoFinder output from all 47 species
Zm00001e029696_P001 AGO1, Zm00001e029696 RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IDA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005737 cytoplasm TAS Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
BP GO:0006346 DNA methylation-dependent heterochromatin formation RCA Interproscan
BP GO:0007062 sister chromatid cohesion RCA Interproscan
BP GO:0007155 cell adhesion RCA Interproscan
BP GO:0007267 cell-cell signaling RCA Interproscan
BP GO:0009616 RNAi-mediated antiviral immune response IDA Interproscan
BP GO:0009616 RNAi-mediated antiviral immune response RCA Interproscan
BP GO:0009733 response to auxin IGI Interproscan
BP GO:0009793 embryo development ending in seed dormancy IGI Interproscan
BP GO:0009793 embryo development ending in seed dormancy RCA Interproscan
BP GO:0009850 auxin metabolic process IGI Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009880 embryonic pattern specification RCA Interproscan
BP GO:0009887 animal organ morphogenesis RCA Interproscan
BP GO:0009926 auxin polar transport RCA Interproscan
BP GO:0009955 adaxial/abaxial pattern specification IMP Interproscan
BP GO:0009965 leaf morphogenesis IMP Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010050 vegetative phase change RCA Interproscan
BP GO:0010051 xylem and phloem pattern formation RCA Interproscan
BP GO:0010072 primary shoot apical meristem specification RCA Interproscan
BP GO:0010073 meristem maintenance RCA Interproscan
BP GO:0010090 trichome morphogenesis RCA Interproscan
BP GO:0010218 response to far red light IGI Interproscan
BP GO:0010218 response to far red light RCA Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
BP GO:0010267 ta-siRNA processing RCA Interproscan
BP GO:0010305 leaf vascular tissue pattern formation IMP Interproscan
BP GO:0010431 seed maturation RCA Interproscan
BP GO:0010589 leaf proximal/distal pattern formation IMP Interproscan
BP GO:0016441 post-transcriptional gene silencing IEP Interproscan
BP GO:0016569 obsolete covalent chromatin modification RCA Interproscan
CC GO:0019898 extrinsic component of membrane IDA Interproscan
BP GO:0031047 RNA-mediated gene silencing RCA Interproscan
BP GO:0035195 miRNA-mediated gene silencing IMP Interproscan
BP GO:0035195 miRNA-mediated gene silencing IGI Interproscan
BP GO:0035195 miRNA-mediated gene silencing IEP Interproscan
BP GO:0035196 miRNA processing RCA Interproscan
MF GO:0035197 siRNA binding IPI Interproscan
MF GO:0035198 miRNA binding IPI Interproscan
BP GO:0045010 actin nucleation RCA Interproscan
BP GO:0045087 innate immune response IMP Interproscan
BP GO:0045595 regulation of cell differentiation RCA Interproscan
BP GO:0048439 flower morphogenesis RCA Interproscan
BP GO:0048519 negative regulation of biological process RCA Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0048830 adventitious root development IMP Interproscan
BP GO:0048864 stem cell development IGI Interproscan
BP GO:0051301 cell division RCA Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
BP GO:0006349 regulation of gene expression by genomic imprinting IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006379 mRNA cleavage IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006476 protein deacetylation IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010229 inflorescence development IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016575 histone deacetylation IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016805 dipeptidase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0035601 protein deacylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0098732 macromolecule deacylation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR003100 PAZ_dom 395 516
IPR014811 ArgoL1 335 384
IPR003165 Piwi 677 996
IPR024357 Argonaut_Gly-rich 75 172
IPR032474 Argonaute_N 190 325
IPR032473 Argonaute_Mid_dom 584 659
IPR032472 ArgoL2 527 573
No external refs found!