1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G47810

AT1G47810


Description : F-box and associated interaction domains-containing protein


Gene families : OG0001988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001988_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G47810

Target Alias Description ECC score Gene Family Method Actions
AT1G23037 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT1G26515 No alias F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT1G30790 No alias F-box and associated interaction domains-containing protein 0.09 OrthoFinder output from all 47 species
AT1G30925 No alias phospholipase Cs 0.05 OrthoFinder output from all 47 species
AT1G31163 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT1G31620 No alias unknown protein; Has 9 Blast hits to 9 proteins in 2... 0.05 OrthoFinder output from all 47 species
AT1G32660 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT1G33010 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT1G43005 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
AT1G46840 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT1G50880 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT1G53360 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT1G53370 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G53815 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT1G55070 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G59690 No alias F-box associated ubiquitination effector family protein 0.09 OrthoFinder output from all 47 species
AT1G60370 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT1G67130 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT2G02890 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
AT2G16450 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT2G16810 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT2G23160 No alias F-box family protein 0.09 OrthoFinder output from all 47 species
AT2G31470 DOR F-box and associated interaction domains-containing protein 0.06 OrthoFinder output from all 47 species
AT2G32470 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G04660 No alias F-box and associated interaction domains-containing protein 0.07 OrthoFinder output from all 47 species
AT3G10790 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from all 47 species
AT3G49440 No alias F-box associated ubiquitination effector family protein 0.02 OrthoFinder output from all 47 species
AT3G52320 No alias F-box and associated interaction domains-containing protein 0.1 OrthoFinder output from all 47 species
AT3G52330 No alias F-box associated ubiquitination effector family protein 0.03 OrthoFinder output from all 47 species
AT3G61340 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT4G19930 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT4G19940 No alias F-box and associated interaction domains-containing protein 0.11 OrthoFinder output from all 47 species
AT4G29970 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT4G38870 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from all 47 species
AT5G38810 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species
AT5G42430 No alias F-box and associated interaction domains-containing protein 0.04 OrthoFinder output from all 47 species
AT5G44345 No alias F-box associated ubiquitination effector family protein 0.06 OrthoFinder output from all 47 species
AT5G50220 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
AT5G52610 No alias F-box and associated interaction domains-containing protein 0.08 OrthoFinder output from all 47 species
AT5G52620 No alias F-box associated ubiquitination effector family protein 0.05 OrthoFinder output from all 47 species
AT5G62060 No alias F-box and associated interaction domains-containing protein 0.02 OrthoFinder output from all 47 species
AT5G65850 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 14 54
IPR013187 F-box-assoc_dom_typ3 232 348
No external refs found!