AT1G44900 (MCM2, ATMCM2)


Aliases : MCM2, ATMCM2

Description : minichromosome maintenance (MCM2/3/5) family protein


Gene families : OG0004206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004206_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G44900
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00242770 MCM2, ATMCM2,... Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.21 OrthoFinder output from all 47 species
Adi_g014964 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Aev_g18657 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.02 OrthoFinder output from all 47 species
Ala_g28049 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.04 OrthoFinder output from all 47 species
Als_g05684 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Als_g06371 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Aop_g09602 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Aspi01Gene05001.t1 MCM2, ATMCM2,... component *(MCM2) of MCM replicative DNA helicase... 0.11 OrthoFinder output from all 47 species
Azfi_s0207.g057897 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.08 OrthoFinder output from all 47 species
Ceric.10G002200.1 MCM2, ATMCM2,... component *(MCM2) of MCM replicative DNA helicase... 0.2 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.77 MCM2, ATMCM2 DNA replication licensing factor MCM2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Cre07.g338000 MCM2, ATMCM2 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.14 OrthoFinder output from all 47 species
Dac_g07583 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Dcu_g07094 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.12 OrthoFinder output from all 47 species
GSVIVT01001119001 MCM2, ATMCM2 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.15 OrthoFinder output from all 47 species
Gb_10893 MCM2, ATMCM2 component MCM2 of MCM replicative DNA helicase complex 0.13 OrthoFinder output from all 47 species
LOC_Os11g29380.1 MCM2, ATMCM2,... component MCM2 of MCM replicative DNA helicase complex 0.13 OrthoFinder output from all 47 species
Len_g09187 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.11 OrthoFinder output from all 47 species
Lfl_g39064 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
MA_10431703g0010 MCM2, ATMCM2 DNA replication licensing factor MCM2 OS=Oryza sativa... 0.15 OrthoFinder output from all 47 species
Mp3g00130.1 MCM2, ATMCM2 component MCM2 of MCM replicative DNA helicase complex 0.15 OrthoFinder output from all 47 species
Msp_g13902 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Nbi_g03122 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.14 OrthoFinder output from all 47 species
Ppi_g15758 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023976 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.05 OrthoFinder output from all 47 species
Sam_g04440 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g14284 No alias component *(MCM2) of MCM replicative DNA helicase... 0.03 OrthoFinder output from all 47 species
Sam_g14285 No alias component *(MCM2) of MCM replicative DNA helicase... 0.09 OrthoFinder output from all 47 species
Smo88537 MCM2, ATMCM2 Cell cycle.interphase.DNA replication.preinitiation.MCM... 0.04 OrthoFinder output from all 47 species
Solyc11g040120.3.1 MCM2, ATMCM2,... component MCM2 of MCM replicative DNA helicase complex 0.15 OrthoFinder output from all 47 species
Spa_g05361 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.1 OrthoFinder output from all 47 species
Tin_g44536 MCM2, ATMCM2 component *(MCM2) of MCM replicative DNA helicase... 0.11 OrthoFinder output from all 47 species
Zm00001e021446_P001 MCM2, ATMCM2,... component MCM2 of MCM replicative DNA helicase complex 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0005524 ATP binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006084 acetyl-CoA metabolic process RCA Interproscan
BP GO:0006260 DNA replication RCA Interproscan
BP GO:0006261 DNA-templated DNA replication RCA Interproscan
BP GO:0006268 DNA unwinding involved in DNA replication TAS Interproscan
BP GO:0006270 DNA replication initiation ISS Interproscan
BP GO:0006270 DNA replication initiation RCA Interproscan
BP GO:0006275 regulation of DNA replication RCA Interproscan
BP GO:0006306 DNA methylation RCA Interproscan
MF GO:0008094 ATP-dependent activity, acting on DNA ISS Interproscan
BP GO:0008283 cell population proliferation IEP Interproscan
BP GO:0008283 cell population proliferation RCA Interproscan
BP GO:0009165 nucleotide biosynthetic process RCA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0010082 regulation of root meristem growth IMP Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
BP GO:0042127 regulation of cell population proliferation IMP Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0051567 histone H3-K9 methylation RCA Interproscan
BP GO:0051726 regulation of cell cycle RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP HCCA
BP GO:0000075 cell cycle checkpoint signaling IEP HCCA
BP GO:0000076 DNA replication checkpoint signaling IEP HCCA
MF GO:0000217 DNA secondary structure binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000228 nuclear chromosome IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000281 mitotic cytokinesis IEP HCCA
MF GO:0000400 four-way junction DNA binding IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
BP GO:0000710 meiotic mismatch repair IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0000731 DNA synthesis involved in DNA repair IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005658 alpha DNA polymerase:primase complex IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006271 DNA strand elongation involved in DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006349 regulation of gene expression by genomic imprinting IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009200 deoxyribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009202 deoxyribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009292 horizontal gene transfer IEP HCCA
BP GO:0009294 DNA-mediated transformation IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009553 embryo sac development IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010069 zygote asymmetric cytokinesis in embryo sac IEP HCCA
BP GO:0010070 zygote asymmetric cell division IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010216 maintenance of DNA methylation IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010424 DNA methylation on cytosine within a CG sequence IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022616 DNA strand elongation IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031570 DNA integrity checkpoint signaling IEP HCCA
MF GO:0032135 DNA insertion or deletion binding IEP HCCA
MF GO:0032137 guanine/thymine mispair binding IEP HCCA
MF GO:0032138 single base insertion or deletion binding IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032301 MutSalpha complex IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032411 positive regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0032414 positive regulation of ion transmembrane transporter activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032776 DNA methylation on cytosine IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034764 positive regulation of transmembrane transport IEP HCCA
BP GO:0034767 positive regulation of monoatomic ion transmembrane transport IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
BP GO:0042631 cellular response to water deprivation IEP HCCA
BP GO:0043270 positive regulation of monoatomic ion transport IEP HCCA
BP GO:0043570 maintenance of DNA repeat elements IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045910 negative regulation of DNA recombination IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048314 embryo sac morphogenesis IEP HCCA
BP GO:0048443 stamen development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0048598 embryonic morphogenesis IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051050 positive regulation of transport IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0071229 cellular response to acid chemical IEP HCCA
BP GO:0071462 cellular response to water stimulus IEP HCCA
BP GO:0071588 hydrogen peroxide mediated signaling pathway IEP HCCA
BP GO:0071897 DNA biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement IEP HCCA
BP GO:1901528 hydrogen peroxide mediated signaling pathway involved in stomatal movement IEP HCCA
BP GO:1901529 positive regulation of anion channel activity IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901988 negative regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1903793 positive regulation of monoatomic anion transport IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
BP GO:1903961 positive regulation of anion transmembrane transport IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR027925 MCM_N 220 312
IPR033762 MCM_OB 319 446
IPR001208 MCM_dom 487 709
IPR008045 MCM2 40 191
No external refs found!