AT1G43850 (SEU)

Aliases : SEU

Description : SEUSS transcriptional co-regulator

Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G43850

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene39070.t1	SEU, Aspi01Gene39070	adapter component *(SEU/SLK) of transcriptional...	0.03	OrthoFinder output from all 47 species
Cba_g22419	SEU	adapter component *(SEU/SLK) of transcriptional...	0.02	OrthoFinder output from all 47 species
Ceric.03G041400.1	SEU, Ceric.03G041400	adapter component *(SEU/SLK) of transcriptional...	0.06	OrthoFinder output from all 47 species
Dcu_g08980	SEU	adapter component *(SEU/SLK) of transcriptional...	0.03	OrthoFinder output from all 47 species
Ehy_g23719	SEU	adapter component *(SEU/SLK) of transcriptional...	0.04	OrthoFinder output from all 47 species
GSVIVT01010616001	SLK2	Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
Gb_04218	SEU	Transcriptional corepressor SEUSS OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Gb_04695	SLK2	Probable transcriptional regulator SLK2 OS=Arabidopsis...	0.08	OrthoFinder output from all 47 species
Gb_27183	SEU	Transcriptional corepressor SEUSS OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
LOC_Os11g10060.1	SEU, LOC_Os11g10060	Transcriptional corepressor SEUSS OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
LOC_Os11g10070.1	SEU, LOC_Os11g10070	Transcriptional corepressor SEUSS OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Len_g05463	SEU	adapter component *(SEU/SLK) of transcriptional...	0.03	OrthoFinder output from all 47 species
Len_g41806	SEU	adapter component *(SEU/SLK) of transcriptional...	0.04	OrthoFinder output from all 47 species
MA_13825g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_208023g0010	SLK2	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Pir_g13626	SEU	adapter component *(SEU/SLK) of transcriptional...	0.03	OrthoFinder output from all 47 species
Ppi_g04706	SEU	adapter component *(SEU/SLK) of transcriptional...	0.03	OrthoFinder output from all 47 species
Ppi_g14229	SEU	adapter component *(SEU/SLK) of transcriptional...	0.02	OrthoFinder output from all 47 species
Solyc03g026190.3.1	SLK2, Solyc03g026190	Probable transcriptional regulator SLK2 OS=Arabidopsis...	0.1	OrthoFinder output from all 47 species
Solyc06g059750.3.1	SEU, Solyc06g059750	Transcriptional corepressor SEUSS OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
Solyc06g059760.3.1	SEU, Solyc06g059760	Transcriptional corepressor SEUSS OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Tin_g20497	SEU	adapter component *(SEU/SLK) of transcriptional...	0.02	OrthoFinder output from all 47 species
Zm00001e011073_P001	SEU, Zm00001e011073	Transcriptional corepressor SEUSS OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e039584_P001	SEU, Zm00001e039584	Transcriptional corepressor SEUSS OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IDA	Interproscan
MF	GO:0003712	transcription coregulator activity	IMP	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007275	multicellular organism development	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009909	regulation of flower development	IGI	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042743	hydrogen peroxide metabolic process	None	Extended
BP	GO:0042744	hydrogen peroxide catabolic process	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
MF	GO:0046982	protein heterodimerization activity	IPI	Interproscan
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048438	floral whorl development	None	Extended
BP	GO:0048467	gynoecium development	IMP	Interproscan
BP	GO:0048481	plant ovule development	IMP	Interproscan
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
MF	GO:0060090	molecular adaptor activity	IDA	Interproscan
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
BP	GO:0000723	telomere maintenance	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0004484	mRNA guanylyltransferase activity	IEP	HCCA
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005876	spindle microtubule	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006366	transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006370	7-methylguanosine mRNA capping	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006482	protein demethylation	IEP	HCCA
BP	GO:0006625	protein targeting to peroxisome	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008158	hedgehog receptor activity	IEP	HCCA
MF	GO:0008192	RNA guanylyltransferase activity	IEP	HCCA
BP	GO:0008214	protein dealkylation	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009452	7-methylguanosine RNA capping	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
BP	GO:0010216	maintenance of DNA methylation	IEP	HCCA
BP	GO:0010332	response to gamma radiation	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
BP	GO:0016577	histone demethylation	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
BP	GO:0032200	telomere organization	IEP	HCCA
BP	GO:0032204	regulation of telomere maintenance	IEP	HCCA
MF	GO:0032451	demethylase activity	IEP	HCCA
MF	GO:0032452	histone demethylase activity	IEP	HCCA
MF	GO:0032453	histone H3K4 demethylase activity	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0034720	histone H3-K4 demethylation	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
BP	GO:0036260	RNA capping	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043247	telomere maintenance in response to DNA damage	IEP	HCCA
BP	GO:0043574	peroxisomal transport	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0048581	negative regulation of post-embryonic development	IEP	HCCA
MF	GO:0051011	microtubule minus-end binding	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
BP	GO:0070076	histone lysine demethylation	IEP	HCCA
MF	GO:0070568	guanylyltransferase activity	IEP	HCCA
BP	GO:0070988	demethylation	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072662	protein localization to peroxisome	IEP	HCCA
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140457	protein demethylase activity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029005	LIM-bd/SEUSS	309	563

External Links

No external refs found!

AT1G43850 (SEU)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation