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  5. AT1G34380

AT1G34380


Description : 5'-3' exonuclease family protein


Gene families : OG0006778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G34380

Target Alias Description ECC score Gene Family Method Actions
Adi_g047735 No alias plastidial RNA exonuclease & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14268 No alias plastidial RNA exonuclease & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68831 No alias plastidial RNA exonuclease & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21827 No alias plastidial RNA exonuclease & original description: none 0.03 OrthoFinder output from all 47 species
Mp6g02570.1 No alias plastidial exonuclease 0.02 OrthoFinder output from all 47 species
Ppi_g39074 No alias plastidial RNA exonuclease & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019106_P003 Zm00001e019106 plastidial exonuclease 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003991 acetylglutamate kinase activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006525 arginine metabolic process IEP HCCA
BP GO:0006526 arginine biosynthetic process IEP HCCA
BP GO:0006591 ornithine metabolic process IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006651 diacylglycerol biosynthetic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008195 phosphatidate phosphatase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
BP GO:0031425 chloroplast RNA processing IEP HCCA
MF GO:0034618 arginine binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042450 arginine biosynthetic process via ornithine IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045962 positive regulation of development, heterochronic IEP HCCA
BP GO:0046339 diacylglycerol metabolic process IEP HCCA
BP GO:0046443 FAD metabolic process IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA
BP GO:0072387 flavin adenine dinucleotide metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR020046 5-3_exonucl_a-hlix_arch_N 102 210
No external refs found!