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AT1G31440


Description : SH3 domain-containing protein


Gene families : OG0001132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G31440
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT4G39020 No alias SH3 domain-containing protein 0.05 OrthoFinder output from all 47 species
Adi_g020840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04308 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13200 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19839 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08022 No alias VPS23-interacting protein *(SH3P2) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0012505 endomembrane system IDA Interproscan
MF GO:0030276 clathrin binding IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:1900055 regulation of leaf senescence IEP HCCA
BP GO:1900056 negative regulation of leaf senescence IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 373 421
No external refs found!