AT1G31050

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G31050
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00014p00103240	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
AMTR_s00043p00225670	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
AMTR_s00167p00019840	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
AT1G27660	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.06	OrthoFinder output from all 47 species
AT3G20640	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.07	OrthoFinder output from all 47 species
AT4G05170	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.06	OrthoFinder output from all 47 species
AT4G29100	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.1	OrthoFinder output from all 47 species
Adi_g087038	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g06761	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g37882	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g05836	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14362	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g21207	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09878	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene71895.t1	Aspi01Gene71895	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g33477	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.32G003100.1	Ceric.32G003100	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.32G036000.1	Ceric.32G036000	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.33G028900.1	Ceric.33G028900	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.33G029000.1	Ceric.33G029000	not classified & original description: pacid=50607112...	0.04	OrthoFinder output from all 47 species
Dac_g33543	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g37245	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g04923	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g23407	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09942	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g10106	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g14173	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18517	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g23926	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g26124	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g29621	No alias	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g30692	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g32053	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01005301001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.07	OrthoFinder output from all 47 species
GSVIVT01009761001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
GSVIVT01014542001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
GSVIVT01016594001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.06	OrthoFinder output from all 47 species
GSVIVT01018886001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
GSVIVT01038142001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
Gb_06063	No alias	transcription factor (bHLH)	0.07	OrthoFinder output from all 47 species
Gb_07584	No alias	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Gb_21995	No alias	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Gb_40387	No alias	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
LOC_Os01g13000.1	LOC_Os01g13000	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
LOC_Os02g17680.1	LOC_Os02g17680	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os03g55220.1	LOC_Os03g55220	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
LOC_Os04g41570.2	LOC_Os04g41570	transcription factor (bHLH)	0.01	OrthoFinder output from all 47 species
LOC_Os04g47810.1	LOC_Os04g47810	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
LOC_Os05g42180.1	LOC_Os05g42180	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Lfl_g10359	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_504223g0010	No alias	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Mp2g19970.1	No alias	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Msp_g15621	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g26048	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g27626	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g37283	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g32377	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g37653	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g51301	No alias	bHLH-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g05648	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09411	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g13014	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013074	No alias	bHLH-type transcription factor & original description: CDS=1-876	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024982	No alias	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g05050	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g16505	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g18175	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo117274	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
Solyc01g107490.2.1	Solyc01g107490	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc02g079760.3.1	Solyc02g079760	transcription factor (bHLH)	0.08	OrthoFinder output from all 47 species
Solyc02g084880.3.1	Solyc02g084880	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Solyc03g031450.3.1	Solyc03g031450	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Solyc03g120530.3.1	Solyc03g120530	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc04g080710.4.1	Solyc04g080710	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc06g066580.4.1	Solyc06g066580	transcription factor (bHLH)	0.08	OrthoFinder output from all 47 species
Solyc07g020960.3.1	Solyc07g020960	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Solyc10g006640.3.1	Solyc10g006640	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Spa_g16714	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e010350_P001	Zm00001e010350	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e014179_P003	Zm00001e014179	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e016395_P001	Zm00001e016395	transcription factor (bHLH)	0.07	OrthoFinder output from all 47 species
Zm00001e031298_P001	Zm00001e031298	transcription factor (bHLH)	0.01	OrthoFinder output from all 47 species
Zm00001e032055_P001	Zm00001e032055	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e034854_P002	Zm00001e034854	transcription factor (bHLH)	0.07	OrthoFinder output from all 47 species
Zm00001e041465_P001	Zm00001e041465	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0015698	inorganic anion transport	RCA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048527	lateral root development	RCA	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048589	developmental growth	RCA	Interproscan
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
MF	GO:0004064	arylesterase activity	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005242	inward rectifier potassium channel activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005249	voltage-gated potassium channel activity	IEP	HCCA
MF	GO:0005267	potassium channel activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006598	polyamine catabolic process	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0006817	phosphate ion transport	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0008493	tetracycline transmembrane transporter activity	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
BP	GO:0009310	amine catabolic process	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015112	nitrate transmembrane transporter activity	IEP	HCCA
MF	GO:0015114	phosphate ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015665	alcohol transmembrane transporter activity	IEP	HCCA
BP	GO:0015695	organic cation transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022843	voltage-gated monoatomic cation channel activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0080181	lateral root branching	IEP	HCCA
BP	GO:0090333	regulation of stomatal closure	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
MF	GO:0099094	ligand-gated monoatomic cation channel activity	IEP	HCCA
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G31050

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation