AT1G30810


Description : Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein


Gene families : OG0001130 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001130_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G30810
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
MA_97089g0010 PKDM7D Putative lysine-specific demethylase JMJ16... 0.03 OrthoFinder output from all 47 species
Smo406377 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription RCA Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
MF GO:0032453 histone H3K4 demethylase activity IDA Interproscan
BP GO:0048573 photoperiodism, flowering IMP Interproscan
Type GO Term Name Evidence Source
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR003888 FYrich_N 655 699
IPR004198 Znf_C5HC2 519 571
IPR003889 FYrich_C 706 788
IPR003349 JmjN 60 93
IPR003347 JmjC_dom 294 410
No external refs found!