1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G27660

AT1G27660


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G27660

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00103240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00167p00019840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G05170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G21340 B70 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g080195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20087 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37882 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24386 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08571 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21207 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09878 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21733 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28922.t1 Aspi01Gene28922 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G033600.1 Ceric.22G033600 bHLH-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.32G003100.1 Ceric.32G003100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G028900.1 Ceric.33G028900 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.33G029000.1 Ceric.33G029000 not classified & original description: pacid=50607112... 0.03 OrthoFinder output from all 47 species
Dac_g33543 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02751 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23407 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46632 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10106 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29621 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01016594001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_06063 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Gb_07584 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_21995 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Gb_33415 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Gb_40387 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
LOC_Os01g57580.1 LOC_Os01g57580 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os02g17680.1 LOC_Os02g17680 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os03g55220.1 LOC_Os03g55220 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os05g14010.1 LOC_Os05g14010 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os05g42180.1 LOC_Os05g42180 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Len_g36610 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_504223g0010 No alias transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Mp2g19970.1 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Nbi_g04901 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27626 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45184 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18964 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32377 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37653 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09411 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13014 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18804 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013074 No alias bHLH-type transcription factor & original description: CDS=1-876 0.03 OrthoFinder output from all 47 species
Sam_g05050 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16505 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18175 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo28262 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Solyc02g079760.3.1 Solyc02g079760 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc02g084880.3.1 Solyc02g084880 transcription factor (bHLH) 0.1 OrthoFinder output from all 47 species
Solyc03g031450.3.1 Solyc03g031450 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc03g120530.3.1 Solyc03g120530 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc04g080710.4.1 Solyc04g080710 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc06g066580.4.1 Solyc06g066580 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc07g020960.3.1 Solyc07g020960 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc10g006640.3.1 Solyc10g006640 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Spa_g09830 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005748_P002 Zm00001e005748 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e007719_P001 Zm00001e007719 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Zm00001e010350_P001 Zm00001e010350 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e014179_P003 Zm00001e014179 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Zm00001e016395_P001 Zm00001e016395 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Zm00001e019609_P001 Zm00001e019609 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e027157_P001 Zm00001e027157 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034854_P002 Zm00001e034854 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e041465_P001 Zm00001e041465 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004557 alpha-galactosidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005982 starch metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006677 glycosylceramide metabolic process IEP HCCA
BP GO:0006687 glycosphingolipid metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007166 cell surface receptor signaling pathway IEP HCCA
BP GO:0007167 enzyme-linked receptor protein signaling pathway IEP HCCA
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009699 phenylpropanoid biosynthetic process IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009806 lignan metabolic process IEP HCCA
BP GO:0009807 lignan biosynthetic process IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010065 primary meristem tissue development IEP HCCA
BP GO:0010067 procambium histogenesis IEP HCCA
BP GO:0010072 primary shoot apical meristem specification IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010431 seed maturation IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0016137 glycoside metabolic process IEP HCCA
BP GO:0016139 glycoside catabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019377 glycolipid catabolic process IEP HCCA
BP GO:0030149 sphingolipid catabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045597 positive regulation of cell differentiation IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
BP GO:0046477 glycosylceramide catabolic process IEP HCCA
BP GO:0046479 glycosphingolipid catabolic process IEP HCCA
BP GO:0046514 ceramide catabolic process IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048507 meristem development IEP HCCA
BP GO:0048508 embryonic meristem development IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080147 root hair cell development IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090421 embryonic meristem initiation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!