AT1G26960 (AtHB23, HB23)

Aliases : AtHB23, HB23

Description : homeobox protein 23

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G26960

Target	Alias	Description	ECC score	Gene Family Method
AT1G27045	No alias	Homeobox-leucine zipper protein family	0.03	OrthoFinder output from all 47 species
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.03	OrthoFinder output from all 47 species
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.03	OrthoFinder output from all 47 species
Aev_g10824	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ala_g10993	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g21530	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g22584	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g32740	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Als_g63335	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g07592	HB51, ATHB51, LMI1	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g10606	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Gb_07295	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os03g07450.1	ATHB13, LOC_Os03g07450	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os04g45810.1	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
LOC_Os08g32080.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os08g32085.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
LOC_Os10g23090.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
LOC_Os10g26500.1	ATHB13, LOC_Os10g26500	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Len_g04607	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Len_g16712	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Lfl_g02863	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g03374	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
MA_19453g0050	ATHB1, ATHB-1,...	Homeobox-leucine zipper protein HAT5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_9241385g0010	ATHB13	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Nbi_g07680	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pir_g40617	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g15485	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018854	HB6, ATHB6	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Solyc01g010600.4.1	AtHB23, HB23,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc02g067410.2.1	ATHB3, HB-3,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Solyc02g077590.1.1	ATHB52, HB52,...	transcription factor (HD-ZIP I/II)	0.06	OrthoFinder output from all 47 species
Solyc02g087840.3.1	ATHB3, HB-3,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc09g008810.3.1	HB51, ATHB51,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Spa_g11388	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e010218_P001	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.07	OrthoFinder output from all 47 species
Zm00001e015274_P001	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Zm00001e038833_P001	ATHB16, HB16,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0045892	negative regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0048598	embryonic morphogenesis	IEP	HCCA
BP	GO:0048826	cotyledon morphogenesis	IEP	HCCA
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	HCCA
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000280	regulation of root development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	71	124
IPR003106	Leu_zip_homeo	126	166

External Links

No external refs found!

AT1G26960 (AtHB23, HB23)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation