AT1G26780 (AtMYB117, LOF1, MYB117)

Aliases : AtMYB117, LOF1, MYB117

Description : myb domain protein 117

Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G26780
Cluster	HCCA: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272410	AtMYB98, MYB98,...	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
AMTR_s00010p00264600	AtMYB117, LOF1,...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AMTR_s00024p00137930	MYB54, ATMYB54,...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AT1G73410	MYB54, ATMYB54	myb domain protein 54	0.04	OrthoFinder output from all 47 species
AT3G29020	MYB110, AtMYB110	myb domain protein 110	0.09	OrthoFinder output from all 47 species
AT5G11050	MYB64, AtMYB64	myb domain protein 64	0.03	OrthoFinder output from all 47 species
AT5G17800	MYB56, AtMYB56	myb domain protein 56	0.04	OrthoFinder output from all 47 species
AT5G40360	MYB115, AtMYB115	myb domain protein 115	0.04	OrthoFinder output from all 47 species
AT5G40430	MYB22, AtMYB22	myb domain protein 22	0.04	OrthoFinder output from all 47 species
Adi_g047581	MYB54, ATMYB54	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Adi_g074060	MYB70, AtMYB70	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Ala_g27236	BW52, ATMYB52, MYB52	MYB class-R2R3 subgroup-21 transcription factor &...	0.04	OrthoFinder output from all 47 species
Ala_g28266	MYB70, AtMYB70	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Als_g14437	AtMYB117, LOF1, MYB117	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Als_g15721	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Als_g23951	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.04	OrthoFinder output from all 47 species
Als_g47836	MYB3R-1,...	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g57490	MYB3R-3, AtMYB3R3	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene54282.t1	MYB1, AtMYB1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69491.t1	LOF2, MYB105,...	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Azfi_s0130.g049054	MYB54, ATMYB54	not classified & original description: CDS=1-720	0.06	OrthoFinder output from all 47 species
Azfi_s3609.g116385	MYB73, ATMYB73	not classified & original description: CDS=1-897	0.03	OrthoFinder output from all 47 species
Ceric.19G007400.1	LOF2, MYB105,...	MYB class-R2R3 subgroup-21 transcription factor &...	0.04	OrthoFinder output from all 47 species
Ceric.25G047900.1	MYB1, AtMYB1,...	not classified & original description: pacid=50594505...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021108.38	PGA37, ATMYB118, MYB118	RNA biosynthesis.transcriptional activation.MYB...	0.01	OrthoFinder output from all 47 species
Dcu_g09101	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Dcu_g43014	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.04	OrthoFinder output from all 47 species
Ehy_g09643	MYBR1, MYB44,...	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Ehy_g10987	LOF2, MYB105, ATMYB105	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g24773	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
GSVIVT01008484001	MYB54, ATMYB54	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01019967001	AtMYB117, LOF1, MYB117	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
GSVIVT01034041001	MYB1, AtMYB1	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Gb_06298	AtMYB117, LOF1, MYB117	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
Gb_24073	MYB77	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
LOC_Os01g16810.1	LOF2, MYB105,...	transcription factor (MYB)	0.08	OrthoFinder output from all 47 species
LOC_Os01g74590.1	MYBR1, MYB44,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
LOC_Os03g51110.1	BW52, ATMYB52,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
LOC_Os08g33800.1	LOF2, MYB105,...	transcription factor (MYB)	0.06	OrthoFinder output from all 47 species
LOC_Os11g10130.1	BW52, ATMYB52,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
Len_g16435	ATMYB3R5, MYB3R-5	R1R2R3-MYB transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g56915	MYB88, AtMYB88	MYB class-R2R3 transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g25897	MYB77	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_120049g0010	MYBR1, MYB44,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
MA_89624g0010	LOF2, MYB105, ATMYB105	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Msp_g11561	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.04	OrthoFinder output from all 47 species
Pnu_g11690	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Pp3c17_19960V3.1	Pp3c17_19960	No annotation	0.02	OrthoFinder output from all 47 species
Ppi_g12324	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000153	MYB56, AtMYB56	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010250	ATMYB119, MYB119	not classified & original description: CDS=1-2799	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021926	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.04	OrthoFinder output from all 47 species
Sam_g12139	No alias	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Smo6091	AtMYB117, LOF1, MYB117	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Solyc05g007870.3.1	LOF2, MYB105,...	transcription factor (MYB)	0.1	OrthoFinder output from all 47 species
Tin_g43768	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Zm00001e005044_P002	ATMYB119,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e017365_P001	LOF2, MYB105,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e018391_P001	MYB54, ATMYB54,...	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Zm00001e021349_P001	BW52, ATMYB52,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010199	organ boundary specification between lateral organs and the meristem	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048859	formation of anatomical boundary	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090691	formation of plant organ boundary	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
BP	GO:0003156	regulation of animal organ formation	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009798	axis specification	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009943	adaxial/abaxial axis specification	IEP	HCCA
BP	GO:0009947	centrolateral axis specification	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010160	formation of animal organ boundary	IEP	HCCA
BP	GO:0010223	secondary shoot formation	IEP	HCCA
BP	GO:0010346	shoot axis formation	IEP	HCCA
BP	GO:0010865	stipule development	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0040034	regulation of development, heterochronic	IEP	HCCA
BP	GO:0048504	regulation of timing of animal organ formation	IEP	HCCA
BP	GO:0048513	animal organ development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:2000027	regulation of animal organ morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	150	193
IPR001005	SANT/Myb	98	143

External Links

No external refs found!

AT1G26780 (AtMYB117, LOF1, MYB117)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation