1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G23060

AT1G23060


Description : BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT1G70950.1); Has 449 Blast hits to 419 proteins in 98 species: Archae - 0; Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).


Gene families : OG0003425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003425_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G23060
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00082840 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule... 0.02 OrthoFinder output from all 47 species
Cba_g32826 No alias microtubule-stabilizing factor *(WDL) & original... 0.02 OrthoFinder output from all 47 species
Len_g21981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_8734016g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g31149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo446322 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g005060.3.1 Solyc04g005060 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Solyc05g008090.3.1 Solyc05g008090 microtubule-stabilizing factor (WDL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000036 acyl carrier activity IEP HCCA
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0005310 dicarboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006638 neutral lipid metabolic process IEP HCCA
BP GO:0006639 acylglycerol metabolic process IEP HCCA
BP GO:0006641 triglyceride metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP HCCA
BP GO:0009413 response to flooding IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009828 plant-type cell wall loosening IEP HCCA
BP GO:0009831 plant-type cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0010026 trichome differentiation IEP HCCA
BP GO:0010143 cutin biosynthetic process IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015140 malate transmembrane transporter activity IEP HCCA
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016297 acyl-[acyl-carrier-protein] hydrolase activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0019432 triglyceride biosynthetic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0019953 sexual reproduction IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0033306 phytol metabolic process IEP HCCA
MF GO:0034007 S-linalool synthase activity IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042214 terpene metabolic process IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042547 cell wall modification involved in multidimensional cell growth IEP HCCA
BP GO:0043692 monoterpene metabolic process IEP HCCA
BP GO:0043693 monoterpene biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0044620 ACP phosphopantetheine attachment site binding IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046246 terpene biosynthetic process IEP HCCA
BP GO:0046460 neutral lipid biosynthetic process IEP HCCA
BP GO:0046463 acylglycerol biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
MF GO:0051192 prosthetic group binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0071423 malate transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140414 phosphopantetheine-dependent carrier activity IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1903173 fatty alcohol metabolic process IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!