AT1G22985

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G22985
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
Adi_g013119	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Adi_g013120	ATERF11, ERF11	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aob_g26601	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aop_g12266	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.02	OrthoFinder output from all 47 species
Aop_g19913	DREB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g25155	Rap2.6L	subgroup ERF-X transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g25492	DEAR1, CEJ1, ATERF#011	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g04639	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g07660	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g32120	ERF-1, ATERF-1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.02G058000.1	ERF7, ATERF7,...	not classified & original description: pacid=50585662...	0.03	OrthoFinder output from all 47 species
Ceric.05G034500.1	DEAR2, Ceric.05G034500	not classified & original description: pacid=50578330...	0.02	OrthoFinder output from all 47 species
Cre08.g364400	RAP2.2	No description available	0.02	OrthoFinder output from all 47 species
Dde_g02021	RAP2.2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_29220	ERF-1, ATERF-1	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os02g09650.1	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os02g52670.1	ERF110, LOC_Os02g52670	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os02g54050.1	LOC_Os02g54050	Ethylene-responsive transcription factor ERF018...	0.02	OrthoFinder output from all 47 species
LOC_Os04g34970.1	ERF110, LOC_Os04g34970	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
LOC_Os06g09390.1	RAP2.12, LOC_Os06g09390	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g26420.5	RAP2.12, LOC_Os09g26420	transcription factor (ERF)	0.01	OrthoFinder output from all 47 species
Len_g20664	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_113446g0010	ORA47	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Msp_g14031	ATERF4, RAP2.5,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Msp_g24887	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Nbi_g26195	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Ore_g07819	DREB2A, DREB2	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Pnu_g20605	Rap2.6L	subgroup ERF-X transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g33570	TMO3, CRF2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g17524	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g55442	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Solyc01g090560.4.1	Solyc01g090560	transcription factor (DREB)	0.01	OrthoFinder output from all 47 species
Solyc04g078640.3.1	DEAR2, Solyc04g078640	transcription factor (DREB)	0.04	OrthoFinder output from all 47 species
Spa_g22026	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g25610	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g52130	No alias	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g00486	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Zm00001e008306_P001	Rap2.6L, Zm00001e008306	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e024001_P001	Zm00001e024001	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0009408	response to heat	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0034605	cellular response to heat	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	74	126

External Links

No external refs found!

AT1G22985

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation