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AT1G22510


Description : RING/U-box protein with domain of unknown function (DUF 1232)


Gene families : OG0005323 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005323_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G22510
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Ceric.02G030700.1 Ceric.02G030700 E3 ubiquitin ligase *(RNF170) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.33 No alias No description available 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
BP GO:0000578 embryonic axis specification IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0005102 signaling receptor binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009554 megasporogenesis IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009798 axis specification IEP HCCA
BP GO:0009880 embryonic pattern specification IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010262 somatic embryogenesis IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0031099 regeneration IEP HCCA
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR010652 DUF1232 130 164
No external refs found!