AT1G22280 (PAPP2C)

Aliases : PAPP2C

Description : phytochrome-associated protein phosphatase type 2C

Gene families : OG0000578 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000578_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G22280
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00232020	evm_27.TU.AmTr_v1...	Protein modification.dephosphorylation.serine/threonine...	0.03	OrthoFinder output from all 47 species
AMTR_s00038p00188490	PAPP2C,...	Protein modification.dephosphorylation.serine/threonine...	0.03	OrthoFinder output from all 47 species
AMTR_s00183p00042550	evm_27.TU.AmTr_v1...	Protein modification.dephosphorylation.serine/threonine...	0.02	OrthoFinder output from all 47 species
Adi_g086385	No alias	clade F phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g37458	No alias	clade F phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g01082	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g37504	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g02436	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g56496	No alias	clade F phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g70123	No alias	clade F phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g70124	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10471.t1	Aspi01Gene10471	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0371.g067128	No alias	clade F phosphatase & original description: CDS=145-1188	0.03	OrthoFinder output from all 47 species
Ceric.01G118400.1	Ceric.01G118400	clade F phosphatase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.07G076700.1	Ceric.07G076700	clade F phosphatase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.24G005500.1	Ceric.24G005500	clade F phosphatase & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g09149	No alias	clade F phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g12953	No alias	clade F phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g32565	No alias	clade F phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g03275	No alias	clade F phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g51152	No alias	clade F phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g05392	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06504	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01034268001	No alias	Protein modification.dephosphorylation.serine/threonine...	0.09	OrthoFinder output from all 47 species
Gb_08517	No alias	clade F phosphatase	0.05	OrthoFinder output from all 47 species
LOC_Os04g37904.1	LOC_Os04g37904	clade F phosphatase	0.04	OrthoFinder output from all 47 species
Len_g01698	No alias	clade F phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Len_g08442	No alias	clade F phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
MA_174291g0010	No alias	clade F phosphatase	0.02	OrthoFinder output from all 47 species
Mp5g14150.1	No alias	clade F phosphatase	0.03	OrthoFinder output from all 47 species
Msp_g24935	No alias	clade F phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g03622	No alias	clade F phosphatase & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g26452	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g19301	No alias	clade F phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g19302	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63371	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g00561	No alias	clade F phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g39711	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004848	No alias	clade F phosphatase & original description: CDS=128-1219	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011718	No alias	clade F phosphatase & original description: CDS=155-994	0.04	OrthoFinder output from all 47 species
Sam_g10240	No alias	clade F phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Smo230443	No alias	Protein modification.dephosphorylation.serine/threonine...	0.05	OrthoFinder output from all 47 species
Solyc01g105280.3.1	Solyc01g105280	clade F phosphatase	0.06	OrthoFinder output from all 47 species
Solyc10g047290.2.1	Solyc10g047290	clade F phosphatase	0.04	OrthoFinder output from all 47 species
Spa_g07895	No alias	clade F phosphatase & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g07896	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g17248	No alias	clade F phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g19235	No alias	clade F phosphatase & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g23913	No alias	clade F phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e035067_P001	Zm00001e035067	clade F phosphatase	0.03	OrthoFinder output from all 47 species
Zm00001e041615_P001	Zm00001e041615	clade F phosphatase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002237	response to molecule of bacterial origin	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004721	phosphoprotein phosphatase activity	IDA	Interproscan
MF	GO:0004722	protein serine/threonine phosphatase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006470	protein dephosphorylation	IDA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009692	ethylene metabolic process	None	Extended
BP	GO:0009693	ethylene biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010114	response to red light	None	Extended
BP	GO:0010161	red light signaling pathway	IEP	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016311	dephosphorylation	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043449	cellular alkene metabolic process	None	Extended
BP	GO:0043450	alkene biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0071491	cellular response to red light	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120251	hydrocarbon biosynthetic process	None	Extended
BP	GO:0120252	hydrocarbon metabolic process	None	Extended
BP	GO:0120254	olefinic compound metabolic process	None	Extended
BP	GO:0120255	olefinic compound biosynthetic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1900673	olefin metabolic process	None	Extended
BP	GO:1900674	olefin biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0002229	defense response to oomycetes	IEP	HCCA
BP	GO:0002239	response to oomycetes	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0003954	NADH dehydrogenase activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004675	transmembrane receptor protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004709	MAP kinase kinase kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005102	signaling receptor binding	IEP	HCCA
CC	GO:0005789	endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006955	immune response	IEP	HCCA
BP	GO:0006984	ER-nucleus signaling pathway	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008728	GTP diphosphokinase activity	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009694	jasmonic acid metabolic process	IEP	HCCA
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009723	response to ethylene	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009738	abscisic acid-activated signaling pathway	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009753	response to jasmonic acid	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010449	root meristem growth	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015748	organophosphate ester transport	IEP	HCCA
BP	GO:0015914	phospholipid transport	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016778	diphosphotransferase activity	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
BP	GO:0022622	root system development	IEP	HCCA
BP	GO:0030968	endoplasmic reticulum unfolded protein response	IEP	HCCA
CC	GO:0031304	obsolete intrinsic component of mitochondrial inner membrane	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
MF	GO:0032182	ubiquitin-like protein binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0035266	meristem growth	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
MF	GO:0043130	ubiquitin binding	IEP	HCCA
BP	GO:0043200	response to amino acid	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045087	innate immune response	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0045926	negative regulation of growth	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046620	regulation of organ growth	IEP	HCCA
BP	GO:0046621	negative regulation of organ growth	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0046982	protein heterodimerization activity	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048317	seed morphogenesis	IEP	HCCA
BP	GO:0048482	plant ovule morphogenesis	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0048640	negative regulation of developmental growth	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0052386	cell wall thickening	IEP	HCCA
BP	GO:0052543	callose deposition in cell wall	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0070542	response to fatty acid	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902065	response to L-glutamate	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001932	PPM-type_phosphatase-like_dom	42	273

External Links

No external refs found!

AT1G22280 (PAPP2C)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation