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  5. AT1G21200

AT1G21200


Description : sequence-specific DNA binding transcription factors


Gene families : OG0002213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G21200

Target Alias Description ECC score Gene Family Method Actions
Aev_g07914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004445 inositol-polyphosphate 5-phosphatase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005244 voltage-gated monoatomic ion channel activity IEP HCCA
MF GO:0005249 voltage-gated potassium channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005267 potassium channel activity IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008076 voltage-gated potassium channel complex IEP HCCA
MF GO:0008195 phosphatidate phosphatase activity IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
BP GO:0010628 positive regulation of gene expression IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016036 cellular response to phosphate starvation IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0022843 voltage-gated monoatomic cation channel activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034250 positive regulation of amide metabolic process IEP HCCA
CC GO:0034702 ion channel complex IEP HCCA
CC GO:0034703 cation channel complex IEP HCCA
CC GO:0034705 potassium channel complex IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0045727 positive regulation of translation IEP HCCA
MF GO:0046030 inositol trisphosphate phosphatase activity IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052745 inositol phosphate phosphatase activity IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!