AT1G21170 (SEC5B)

Aliases : SEC5B

Description : Exocyst complex component SEC5

Gene families : OG0003582 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003582_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G21170
Cluster	HCCA: Cluster_130

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00056570	SEC5A,...	Vesicle trafficking.target membrane tethering.Exocyst...	0.04	OrthoFinder output from all 47 species
Adi_g054733	SEC5A	component *(SEC5) of Exocyst complex & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g02588	SEC5B	component *(SEC5) of Exocyst complex & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g15079	SEC5A	component *(SEC5) of Exocyst complex & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12574	SEC5A	component *(SEC5) of Exocyst complex & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g02374	SEC5B	component *(SEC5) of Exocyst complex & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0005.g009220	SEC5B	component *(SEC5) of Exocyst complex & original...	0.04	OrthoFinder output from all 47 species
Ceric.19G007800.1	SEC5A, Ceric.19G007800	component *(SEC5) of Exocyst complex & original...	0.09	OrthoFinder output from all 47 species
Ceric.1Z270400.1	SEC5A, Ceric.1Z270400	component *(SEC5) of Exocyst complex & original...	0.02	OrthoFinder output from all 47 species
LOC_Os04g34450.1	SEC5A, LOC_Os04g34450	component SEC5 of Exocyst complex	0.08	OrthoFinder output from all 47 species
Len_g16769	SEC5A	component *(SEC5) of Exocyst complex & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g04241	SEC5A	component *(SEC5) of Exocyst complex & original description: none	0.08	OrthoFinder output from all 47 species
MA_10427077g0010	SEC5B	component SEC5 of Exocyst complex	0.06	OrthoFinder output from all 47 species
MA_23766g0010	SEC5A	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_83197g0010	SEC5B	component SEC5 of Exocyst complex	0.06	OrthoFinder output from all 47 species
Mp4g01630.1	SEC5B	component SEC5 of Exocyst complex	0.13	OrthoFinder output from all 47 species
Nbi_g42488	SEC5A	component *(SEC5) of Exocyst complex & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g37593	SEC5B	component *(SEC5) of Exocyst complex & original description: none	0.04	OrthoFinder output from all 47 species
Smo267231	SEC5B	Vesicle trafficking.target membrane tethering.Exocyst...	0.07	OrthoFinder output from all 47 species
Solyc04g071350.3.1	SEC5A, Solyc04g071350	component SEC5 of Exocyst complex	0.11	OrthoFinder output from all 47 species
Zm00001e040866_P001	SEC5A, Zm00001e040866	component SEC5 of Exocyst complex	0.14	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009846	pollen germination	IGI	Interproscan
BP	GO:0009860	pollen tube growth	IGI	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
CC	GO:0000325	plant-type vacuole	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	HCCA
MF	GO:0004430	1-phosphatidylinositol 4-kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008281	sulfonylurea receptor activity	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009887	animal organ morphogenesis	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0010072	primary shoot apical meristem specification	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
BP	GO:0010235	guard mother cell cytokinesis	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
BP	GO:0015931	nucleobase-containing compound transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016926	protein desumoylation	IEP	HCCA
BP	GO:0022402	cell cycle process	IEP	HCCA
BP	GO:0030007	cellular potassium ion homeostasis	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030126	COPI vesicle coat	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0033044	regulation of chromosome organization	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0035281	pre-miRNA export from nucleus	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043090	amino acid import	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
CC	GO:0048471	perinuclear region of cytoplasm	IEP	HCCA
BP	GO:0048581	negative regulation of post-embryonic development	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
MF	GO:0051015	actin filament binding	IEP	HCCA
BP	GO:0051093	negative regulation of developmental process	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
MF	GO:0052742	phosphatidylinositol kinase activity	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055070	copper ion homeostasis	IEP	HCCA
BP	GO:0055075	potassium ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
MF	GO:0070273	phosphatidylinositol-4-phosphate binding	IEP	HCCA
MF	GO:0070300	phosphatidic acid binding	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR039481	EXOC2/Sec5_N_dom	266	442

External Links

No external refs found!

AT1G21170 (SEC5B)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation