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  5. AT1G20610

AT1G20610 (CYCB2;3)


Aliases : CYCB2;3

Description : Cyclin B2;3


Gene families : OG0000745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G20610
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 CYCB2;3,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.11 OrthoFinder output from all 47 species
AMTR_s00101p00131830 CYCB1;1, CYCB1,... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.09 OrthoFinder output from all 47 species
AT1G16330 CYCB3;1 cyclin b3;1 0.03 OrthoFinder output from all 47 species
AT1G34460 CYC3, CYCB1;5 CYCLIN B1;5 0.03 OrthoFinder output from all 47 species
Adi_g082397 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aev_g38549 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ala_g23920 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Als_g12448 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g15872 CYCB1;2, CYC1BAT not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g16595 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Als_g29465 CYCB1;2, CYC1BAT regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Als_g52020 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Als_g58773 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Aop_g07135 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Aop_g43830 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aop_g70320 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene30752.t1 CYCB2;3, Aspi01Gene30752 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene31815.t1 CYCB2;3, Aspi01Gene31815 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene63213.t2 CYCB2;3, Aspi01Gene63213 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0113.g045905 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Azfi_s0230.g059168 CYCB2;4 not classified & original description: CDS=1-1479 0.05 OrthoFinder output from all 47 species
Azfi_s0872.g090692 CYCB2;4 not classified & original description: CDS=157-1278 0.05 OrthoFinder output from all 47 species
Ceric.06G046300.1 CYCB2;3, Ceric.06G046300 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Ceric.18G071600.1 CYCB2;3, Ceric.18G071600 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Ceric.21G047800.1 CYCB2;3, Ceric.21G047800 regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Ceric.24G055000.1 CYCB2;3, Ceric.24G055000 regulatory protein *(CYCB) of cell cycle & original... 0.12 OrthoFinder output from all 47 species
Ceric.26G002300.1 CYCB2;3, Ceric.26G002300 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Ceric.31G034200.1 CYCB2;3, Ceric.31G034200 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000769.38 CYCB2;1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021312.11 CYCB2;2 G2/mitotic-specific cyclin S13-6 OS=Glycine max 0.02 OrthoFinder output from all 47 species
Cre08.g370401 CYCB2;2 Cyclin-B2-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g17049 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dcu_g01163 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Dcu_g03733 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Dcu_g08761 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01009895001 CYCB2;3 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.1 OrthoFinder output from all 47 species
GSVIVT01025781001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.1 OrthoFinder output from all 47 species
GSVIVT01032782001 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.11 OrthoFinder output from all 47 species
GSVIVT01036739001 CYCB3;1 Cell cycle.regulation.cyclins.CYCB-type cyclin 0.11 OrthoFinder output from all 47 species
Gb_01761 CYCB3;1 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
Gb_03506 CYCB1;4 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
Gb_10664 CYCB2;3 cyclin (CYCB) 0.08 OrthoFinder output from all 47 species
Gb_27795 CYCB1;2, CYC1BAT G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.08 OrthoFinder output from all 47 species
LOC_Os01g59120.1 CYCB1;2,... cyclin (CYCB) 0.11 OrthoFinder output from all 47 species
LOC_Os04g47580.1 CYCB2;3, LOC_Os04g47580 cyclin (CYCB) 0.09 OrthoFinder output from all 47 species
LOC_Os05g41390.1 CYCB1;2,... cyclin (CYCB) 0.1 OrthoFinder output from all 47 species
LOC_Os06g51110.2 CYCB2;3, LOC_Os06g51110 cyclin (CYCB) 0.09 OrthoFinder output from all 47 species
Len_g05365 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Len_g11919 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Len_g56071 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Lfl_g25214 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Lfl_g25818 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
MA_10428837g0030 CYCB1;3, CYC2 cyclin (CYCB) 0.07 OrthoFinder output from all 47 species
MA_10433093g0020 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.07 OrthoFinder output from all 47 species
MA_127335g0010 CYCB2;3 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
MA_311439g0010 CYCB1;3, CYC2 cyclin (CYCB) 0.07 OrthoFinder output from all 47 species
MA_855375g0010 CYCB2;3 Cyclin-B2-1 OS=Oryza sativa subsp. indica... 0.09 OrthoFinder output from all 47 species
Mp2g00590.1 CYCB2;3 cyclin (CYCB) 0.02 OrthoFinder output from all 47 species
Mp5g10030.1 CYCB2;2 cyclin (CYCB) 0.05 OrthoFinder output from all 47 species
Msp_g05360 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Msp_g07854 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Msp_g21114 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.07 OrthoFinder output from all 47 species
Msp_g42899 CYCB2;4 regulatory protein *(CYCB) of cell cycle & original... 0.09 OrthoFinder output from all 47 species
Nbi_g03000 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.1 OrthoFinder output from all 47 species
Nbi_g04270 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Nbi_g39363 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ore_g41900 CYCB2;2 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Pir_g18672 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02940 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g12194 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ppi_g31931 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025590 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025884 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Sam_g16342 No alias regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Smo230742 CYCB1;2, CYC1BAT Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 OrthoFinder output from all 47 species
Solyc01g009040.4.1 CYCB1;2,... cyclin (CYCB) 0.08 OrthoFinder output from all 47 species
Solyc02g082820.3.1 CYCB2;3, Solyc02g082820 cyclin (CYCB) 0.04 OrthoFinder output from all 47 species
Solyc03g032190.3.1 CYCB2;3, Solyc03g032190 cyclin (CYCB) 0.08 OrthoFinder output from all 47 species
Solyc04g081660.3.1 CYCB2;4, Solyc04g081660 Cyclin-B2-4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g082430.3.1 CYCB2;4, Solyc04g082430 cyclin (CYCB) 0.05 OrthoFinder output from all 47 species
Solyc06g073610.3.1 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Solyc07g066660.4.1 CYCB3;1, Solyc07g066660 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
Solyc10g078330.2.1 CYCB1;1, CYCB1,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Solyc10g080950.2.1 CYCB1;2,... cyclin (CYCB) 0.03 OrthoFinder output from all 47 species
Spa_g04211 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Spa_g08492 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Spa_g23146 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.08 OrthoFinder output from all 47 species
Spa_g50231 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Spa_g52264 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Spa_g53648 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Tin_g05068 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Tin_g07321 CYCB2;3 regulatory protein *(CYCB) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g12417 CYCB2;4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007244_P001 CYCB2;3, Zm00001e007244 cyclin (CYCB) 0.11 OrthoFinder output from all 47 species
Zm00001e019528_P002 CYCB1;2,... cyclin (CYCB) 0.08 OrthoFinder output from all 47 species
Zm00001e025467_P001 CYCB1;2,... Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e027336_P001 CYCB1;2,... cyclin (CYCB) 0.05 OrthoFinder output from all 47 species
Zm00001e028899_P002 CYCB1;2,... cyclin (CYCB) 0.11 OrthoFinder output from all 47 species
Zm00001e030146_P001 CYCB2;3, Zm00001e030146 cyclin (CYCB) 0.06 OrthoFinder output from all 47 species
Zm00001e041485_P001 CYCB2;3, Zm00001e041485 cyclin (CYCB) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity ISS Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0001578 microtubule bundle formation IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005819 spindle IEP HCCA
CC GO:0005828 kinetochore microtubule IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005876 spindle microtubule IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007088 regulation of mitotic nuclear division IEP HCCA
BP GO:0007113 endomitotic cell cycle IEP HCCA
BP GO:0007276 gamete generation IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
CC GO:0009574 preprophase band IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0010374 stomatal complex development IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022403 cell cycle phase IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0044848 biological phase IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051302 regulation of cell division IEP HCCA
BP GO:0051322 anaphase IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
BP GO:0090558 plant epidermis development IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 180 305
IPR004367 Cyclin_C-dom 308 422
No external refs found!