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AT1G20080 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB

Description : Calcium-dependent lipid-binding (CaLB domain) family protein


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G20080
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Adi_g012486 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Aev_g17425 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08587 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000841 SYT5, NTMC2T2.1,... not classified & original description: CDS=60-656 0.03 OrthoFinder output from all 47 species
Azfi_s0107.g045165 SYT5, NTMC2T2.1,... not classified & original description: CDS=185-1891 0.03 OrthoFinder output from all 47 species
Cre01.g044600 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre01.g044650 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024034001 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01025699001 NTMC2T1.3, SYT3,... Synaptotagmin-3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g25060.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.03 OrthoFinder output from all 47 species
Nbi_g06946 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015422 NTMC2TYPE4, NTMC2T4 component *(CPSF100/Ydh1) of Cleavage and... 0.02 OrthoFinder output from all 47 species
Sam_g36362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001057_P002 NTMC2TYPE4,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009306 protein secretion IMP Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0007568 aging IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048443 stamen development IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 260 358
IPR000008 C2_dom 419 519
IPR039010 Synaptotagmin_SMP 67 247
No external refs found!