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AT1G19980


Description : cytomatrix protein-related


Gene families : OG0008161 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G19980

Target Alias Description ECC score Gene Family Method Actions
Ala_g32970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01236 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g16003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018610 No alias not classified & original description: CDS=196-1887 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
MF GO:0030371 translation repressor activity IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!