AT1G19780 (ATCNGC8, CNGC8)

Aliases : ATCNGC8, CNGC8

Description : cyclic nucleotide gated channel 8

Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G19780
Cluster	HCCA: Cluster_50

Target	Alias	Description	ECC score	Gene Family Method
Aev_g14826	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Aob_g32862	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Azfi_s0048.g030570	ATCNGC9, CNGC9	cyclic nucleotide-gated cation channel *(CNGC) &...	0.04	OrthoFinder output from all 47 species
GSVIVT01007785001	CNGC18, ATCNGC18	Solute transport.channels.VIC superfamily.cyclic...	0.05	OrthoFinder output from all 47 species
GSVIVT01015970001	ATCNGC8, CNGC8	Solute transport.channels.VIC superfamily.cyclic...	0.04	OrthoFinder output from all 47 species
LOC_Os02g54760.1	ATCNGC17,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
LOC_Os12g06570.1	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.09	OrthoFinder output from all 47 species
LOC_Os12g28260.1	CNGC7, ATCNGC7,...	cyclic nucleotide-gated cation channel (CNGC)	0.06	OrthoFinder output from all 47 species
MA_11172g0010	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Mp4g04110.1	CNGC15, ATCNGC15	cyclic nucleotide-gated cation channel (CNGC)	0.02	OrthoFinder output from all 47 species
Msp_g32178	CNGC5, ATCNGC5	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Ore_g09435	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Ore_g20891	DND1, ATCNGC2, CNGC2	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Pnu_g18538	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Ppi_g06447	CNGC7, ATCNGC7	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025297	DND1, ATCNGC2, CNGC2	cyclic nucleotide-gated cation channel *(CNGC) &...	0.05	OrthoFinder output from all 47 species
Sam_g11868	No alias	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Sam_g31967	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g36093	No alias	cyclic nucleotide-gated cation channel *(CNGC) &...	0.02	OrthoFinder output from all 47 species
Sam_g39902	No alias	cyclic nucleotide-gated cation channel *(CNGC) &...	0.03	OrthoFinder output from all 47 species
Solyc02g086990.4.1	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.09	OrthoFinder output from all 47 species
Solyc03g007260.3.1	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.01	OrthoFinder output from all 47 species
Solyc03g098210.4.1	ATCNGC20,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Solyc06g051920.4.1	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.05	OrthoFinder output from all 47 species
Zm00001e011591_P002	CNGC18,...	cyclic nucleotide-gated cation channel (CNGC)	0.05	OrthoFinder output from all 47 species
Zm00001e017971_P001	CNGC7, ATCNGC7,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species
Zm00001e030701_P001	ATCNGC1, CNGC1,...	cyclic nucleotide-gated cation channel (CNGC)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	IGI	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030551	cyclic nucleotide binding	ISS	Interproscan
BP	GO:0032502	developmental process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048868	pollen tube development	RCA	Interproscan
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0004022	alcohol dehydrogenase (NAD+) activity	IEP	HCCA
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005451	obsolete monoatomic cation:proton antiporter activity	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006814	sodium ion transport	IEP	HCCA
BP	GO:0006828	manganese ion transport	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0007204	positive regulation of cytosolic calcium ion concentration	IEP	HCCA
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009561	megagametogenesis	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0009967	positive regulation of signal transduction	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010647	positive regulation of cell communication	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015385	sodium:proton antiporter activity	IEP	HCCA
BP	GO:0015691	cadmium ion transport	IEP	HCCA
CC	GO:0016324	apical plasma membrane	IEP	HCCA
BP	GO:0017157	regulation of exocytosis	IEP	HCCA
MF	GO:0018455	alcohol dehydrogenase [NAD(P)+] activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0023056	positive regulation of signaling	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030834	regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0035725	sodium ion transmembrane transport	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048584	positive regulation of response to stimulus	IEP	HCCA
BP	GO:0050848	regulation of calcium-mediated signaling	IEP	HCCA
BP	GO:0050850	positive regulation of calcium-mediated signaling	IEP	HCCA
BP	GO:0051046	regulation of secretion	IEP	HCCA
MF	GO:0051139	metal cation:proton antiporter activity	IEP	HCCA
MF	GO:0051219	phosphoprotein binding	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051648	vesicle localization	IEP	HCCA
BP	GO:0051650	establishment of vesicle localization	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
CC	GO:0098590	plasma membrane region	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
MF	GO:0140828	metal cation:monoatomic cation antiporter activity	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1903530	regulation of secretion by cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	529	618
IPR005821	Ion_trans_dom	107	435

External Links

No external refs found!

AT1G19780 (ATCNGC8, CNGC8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation