AT1G18730 (NDF6)

Aliases : NDF6

Description : NDH dependent flow 6

Gene families : OG0009006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009006_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G18730

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00265920	NDF6,...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.12	OrthoFinder output from all 47 species
Aev_g09723	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.07	OrthoFinder output from all 47 species
Ala_g00602	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.03	OrthoFinder output from all 47 species
Als_g36918	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.08	OrthoFinder output from all 47 species
Aob_g09600	No alias	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0113.g045972	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.07	OrthoFinder output from all 47 species
Cba_g00392	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.06	OrthoFinder output from all 47 species
Dac_g43626	No alias	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.03	OrthoFinder output from all 47 species
Dcu_g23025	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.1	OrthoFinder output from all 47 species
Dde_g52018	No alias	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.07	OrthoFinder output from all 47 species
LOC_Os02g51020.1	NDF6, LOC_Os02g51020	component PnsB4/NDF6 of NDH subcomplex B	0.09	OrthoFinder output from all 47 species
Len_g13506	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.04	OrthoFinder output from all 47 species
Lfl_g00528	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.04	OrthoFinder output from all 47 species
Mp3g20430.1	NDF6	component PnsB4/NDF6 of NDH subcomplex B	0.06	OrthoFinder output from all 47 species
Msp_g29166	No alias	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.08	OrthoFinder output from all 47 species
Nbi_g05127	No alias	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.04	OrthoFinder output from all 47 species
Ore_g41888	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.03	OrthoFinder output from all 47 species
Pnu_g05886	NDF6	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.04	OrthoFinder output from all 47 species
Ppi_g60197	No alias	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.06	OrthoFinder output from all 47 species
Sam_g17435	No alias	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.04	OrthoFinder output from all 47 species
Solyc12g036170.2.1	NDF6, Solyc12g036170	component PnsB4/NDF6 of NDH subcomplex B	0.11	OrthoFinder output from all 47 species
Spa_g39504	No alias	component *(PnsB4/NDF6) of NDH subcomplex B & original...	0.04	OrthoFinder output from all 47 species
Zm00001e015807_P001	NDF6, Zm00001e015807	component PnsB4/NDF6 of NDH subcomplex B	0.12	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	RCA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006098	pentose-phosphate shunt	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006364	rRNA processing	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006739	NADP metabolic process	None	Extended
BP	GO:0006740	NADPH regeneration	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009767	photosynthetic electron transport chain	None	Extended
BP	GO:0009773	photosynthetic electron transport in photosystem I	TAS	Interproscan
BP	GO:0009853	photorespiration	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)	NAS	Interproscan
BP	GO:0015979	photosynthesis	RCA	Interproscan
BP	GO:0015994	chlorophyll metabolic process	None	Extended
BP	GO:0015995	chlorophyll biosynthetic process	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019252	starch biosynthetic process	RCA	Interproscan
BP	GO:0019362	pyridine nucleotide metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
CC	GO:0019867	outer membrane	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
BP	GO:0030003	cellular monoatomic cation homeostasis	RCA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046496	nicotinamide nucleotide metabolic process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0051156	glucose 6-phosphate metabolic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0072524	pyridine-containing compound metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004375	glycine dehydrogenase (decarboxylating) activity	IEP	HCCA
MF	GO:0005527	macrolide binding	IEP	HCCA
MF	GO:0005528	FK506 binding	IEP	HCCA
CC	GO:0005960	glycine cleavage complex	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006544	glycine metabolic process	IEP	HCCA
BP	GO:0006546	glycine catabolic process	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0009063	amino acid catabolic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009071	serine family amino acid catabolic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	HCCA
CC	GO:0009344	nitrite reductase complex [NAD(P)H]	IEP	HCCA
BP	GO:0009443	pyridoxal 5'-phosphate salvage	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009657	plastid organization	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015386	potassium:proton antiporter activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016642	oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019464	glycine decarboxylation via glycine cleavage system	IEP	HCCA
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019758	glycosinolate biosynthetic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019761	glucosinolate biosynthetic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
MF	GO:0022821	solute:potassium antiporter activity	IEP	HCCA
CC	GO:0030095	chloroplast photosystem II	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034644	cellular response to UV	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042816	vitamin B6 metabolic process	IEP	HCCA
BP	GO:0042817	pyridoxal metabolic process	IEP	HCCA
BP	GO:0042819	vitamin B6 biosynthetic process	IEP	HCCA
BP	GO:0042821	pyridoxal biosynthetic process	IEP	HCCA
BP	GO:0042822	pyridoxal phosphate metabolic process	IEP	HCCA
BP	GO:0042823	pyridoxal phosphate biosynthetic process	IEP	HCCA
BP	GO:0043085	positive regulation of catalytic activity	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044093	positive regulation of molecular function	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA
BP	GO:0046184	aldehyde biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0050236	pyridoxine:NADP 4-dehydrogenase activity	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
BP	GO:0050790	regulation of catalytic activity	IEP	HCCA
MF	GO:0051139	metal cation:proton antiporter activity	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0065009	regulation of molecular function	IEP	HCCA
BP	GO:0070141	response to UV-A	IEP	HCCA
MF	GO:0070402	NADPH binding	IEP	HCCA
BP	GO:0071478	cellular response to radiation	IEP	HCCA
BP	GO:0071482	cellular response to light stimulus	IEP	HCCA
BP	GO:0071484	cellular response to light intensity	IEP	HCCA
BP	GO:0071486	cellular response to high light intensity	IEP	HCCA
BP	GO:0071492	cellular response to UV-A	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072525	pyridine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
MF	GO:0140828	metal cation:monoatomic cation antiporter activity	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901606	alpha-amino acid catabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G18730 (NDF6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation