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  5. AT1G16180

AT1G16180


Description : Serinc-domain containing serine and sphingolipid biosynthesis protein


Gene families : OG0002419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G16180

Target Alias Description ECC score Gene Family Method Actions
Adi_g010693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05008.t1 Aspi01Gene05008 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017882001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g54990.2 LOC_Os02g54990 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g21220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_330807g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g00787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06301 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo110336 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc06g054420.3.1 Solyc06g054420 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g50282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006623 protein targeting to vacuole RCA Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003837 beta-ureidopropionase activity IEP HCCA
MF GO:0004846 urate oxidase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006144 purine nucleobase metabolic process IEP HCCA
BP GO:0006206 pyrimidine nucleobase metabolic process IEP HCCA
BP GO:0006208 pyrimidine nucleobase catabolic process IEP HCCA
BP GO:0006212 uracil catabolic process IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009112 nucleobase metabolic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016663 oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019860 uracil metabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046113 nucleobase catabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 9 411
No external refs found!