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  5. AT1G15720

AT1G15720 (TRFL5)


Aliases : TRFL5

Description : TRF-like 5


Gene families : OG0003619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G15720
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020538.61 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g03052 TRFL5 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15729 TRFL5 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31866 TRFL5 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02108 TRFL5 telomeric dsDNA-binding protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008156 negative regulation of DNA replication IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009432 SOS response IEP HCCA
BP GO:0009967 positive regulation of signal transduction IEP HCCA
BP GO:0009969 xyloglucan biosynthetic process IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010647 positive regulation of cell communication IEP HCCA
BP GO:0010948 negative regulation of cell cycle process IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0016925 protein sumoylation IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
MF GO:0019789 SUMO transferase activity IEP HCCA
MF GO:0022821 solute:potassium antiporter activity IEP HCCA
BP GO:0023056 positive regulation of signaling IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
BP GO:0032875 regulation of DNA endoreduplication IEP HCCA
BP GO:0032876 negative regulation of DNA endoreduplication IEP HCCA
MF GO:0033843 xyloglucan 6-xylosyltransferase activity IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0045786 negative regulation of cell cycle IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045931 positive regulation of mitotic cell cycle IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048871 multicellular organismal homeostasis IEP HCCA
BP GO:0051053 negative regulation of DNA metabolic process IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0060249 anatomical structure homeostasis IEP HCCA
BP GO:0060250 germ-line stem-cell niche homeostasis IEP HCCA
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0080038 positive regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0090329 regulation of DNA-templated DNA replication IEP HCCA
BP GO:0090333 regulation of stomatal closure IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 341 387
No external refs found!