AT1G14580

Description : C2H2-like zinc finger protein

Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G14580

Target	Alias	Description	ECC score	Gene Family Method
Adi_g028548	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g044340	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g117237	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g14462	IDD14, AtIDD14	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dac_g17016	IDD2, AtIDD2	C2H2 subclass IDD transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01025166001	JKD	RNA biosynthesis.transcriptional activation.C2H2 zinc...	0.04	OrthoFinder output from all 47 species
MA_10436688g0010	IDD16, AtIDD16	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
MA_26324g0010	MGP	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Solyc04g008500.4.1	IDD4, AtIDD4,...	C2H2 zinc finger transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e003771_P001	IDD14, AtIDD14,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e004751_P001	AtIDD7, IDD7,...	C2H2 zinc finger transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e010319_P001	IDD4, AtIDD4,...	C2H2 zinc finger transcription factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0019825	oxygen binding	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013087	Znf_C2H2_type	83	104

External Links

No external refs found!