AT1G12480 (RCD3, CDI3, SLAC1, OZS1)

Aliases : RCD3, CDI3, SLAC1, OZS1

Description : C4-dicarboxylate transporter/malic acid transport protein

Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G12480
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00075p00061010	SLAH3,...	Solute transport.channels.SLAC anion channel	0.03	OrthoFinder output from all 47 species
AT1G62262	SLAH4	SLAC1 homologue 4	0.04	OrthoFinder output from all 47 species
Adi_g007223	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14593	SLAH3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g52513	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene31718.t1	RCD3, CDI3,...	anion channel *(SLAC) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene31718.t2	SLAH3, Aspi01Gene31718	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0099.g044047	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: CDS=77-1816	0.04	OrthoFinder output from all 47 species
Azfi_s1105.g097655	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: CDS=80-1609	0.03	OrthoFinder output from all 47 species
Dac_g36387	SLAH3	anion channel *(SLAC) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g33903	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18127	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g30473	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01030451001	SLAH1	S-type anion channel SLAH1 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
Gb_39068	RCD3, CDI3, SLAC1, OZS1	anion channel (SLAC)	0.02	OrthoFinder output from all 47 species
LOC_Os01g12680.1	SLAH3, LOC_Os01g12680	anion channel (SLAC)	0.03	OrthoFinder output from all 47 species
LOC_Os01g14520.1	SLAH1, LOC_Os01g14520	anion channel (SLAC)	0.03	OrthoFinder output from all 47 species
LOC_Os01g43460.2	SLAH3, LOC_Os01g43460	anion channel (SLAC)	0.03	OrthoFinder output from all 47 species
LOC_Os05g18670.1	SLAH1, LOC_Os05g18670	anion channel (SLAC)	0.04	OrthoFinder output from all 47 species
Lfl_g17605	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g14267	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g24130	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g01359	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06132	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06463	RCD3, CDI3, SLAC1, OZS1	anion channel *(SLAC) & original description: none	0.03	OrthoFinder output from all 47 species
Smo122390	SLAH2	Solute transport.channels.SLAC anion channel	0.02	OrthoFinder output from all 47 species
Solyc08g079770.3.1	RCD3, CDI3,...	anion channel (SLAC)	0.04	OrthoFinder output from all 47 species
Zm00001e026633_P001	SLAH2, Zm00001e026633	anion channel (SLAC)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000302	response to reactive oxygen species	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	ISS	Interproscan
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	IMP	Interproscan
BP	GO:0006863	purine nucleobase transport	RCA	Interproscan
BP	GO:0006873	cellular monoatomic ion homeostasis	IMP	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006979	response to oxidative stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IDA	Interproscan
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IDA	Interproscan
BP	GO:0009270	response to humidity	IMP	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010037	response to carbon dioxide	IMP	Interproscan
BP	GO:0010118	stomatal movement	IMP	Interproscan
BP	GO:0010119	regulation of stomatal movement	None	Extended
BP	GO:0010193	response to ozone	IMP	Interproscan
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
BP	GO:0015851	nucleobase transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IPI	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0030104	water homeostasis	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0048871	multicellular organismal homeostasis	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050878	regulation of body fluid levels	None	Extended
BP	GO:0050891	multicellular organismal water homeostasis	IMP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0090332	stomatal closure	IMP	Interproscan
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902456	regulation of stomatal opening	IMP	Interproscan

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003729	mRNA binding	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0005451	obsolete monoatomic cation:proton antiporter activity	IEP	HCCA
CC	GO:0005786	signal recognition particle, endoplasmic reticulum targeting	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006617	SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	IEP	HCCA
BP	GO:0006814	sodium ion transport	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0006885	regulation of pH	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009850	auxin metabolic process	IEP	HCCA
BP	GO:0010351	lithium ion transport	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
CC	GO:0012505	endomembrane system	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0015301	obsolete anion:anion antiporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0015385	sodium:proton antiporter activity	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015804	neutral amino acid transport	IEP	HCCA
BP	GO:0015824	proline transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030007	cellular potassium ion homeostasis	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034599	cellular response to oxidative stress	IEP	HCCA
BP	GO:0034614	cellular response to reactive oxygen species	IEP	HCCA
BP	GO:0035725	sodium ion transmembrane transport	IEP	HCCA
BP	GO:0042430	indole-containing compound metabolic process	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:0045116	protein neddylation	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
MF	GO:0051139	metal cation:proton antiporter activity	IEP	HCCA
MF	GO:0052638	indole-3-butyrate beta-glucosyltransferase activity	IEP	HCCA
BP	GO:0055075	potassium ion homeostasis	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0062197	cellular response to chemical stress	IEP	HCCA
BP	GO:0070301	cellular response to hydrogen peroxide	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071215	cellular response to abscisic acid stimulus	IEP	HCCA
BP	GO:0071396	cellular response to lipid	IEP	HCCA
BP	GO:0071470	cellular response to osmotic stress	IEP	HCCA
BP	GO:0071472	cellular response to salt stress	IEP	HCCA
BP	GO:0071474	cellular hyperosmotic response	IEP	HCCA
BP	GO:0071475	cellular hyperosmotic salinity response	IEP	HCCA
BP	GO:0080024	indolebutyric acid metabolic process	IEP	HCCA
MF	GO:0080161	auxin transmembrane transporter activity	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0097306	cellular response to alcohol	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
MF	GO:0140828	metal cation:monoatomic cation antiporter activity	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004695	SLAC1/Mae1/Ssu1/TehA	188	494

External Links

No external refs found!

AT1G12480 (RCD3, CDI3, SLAC1, OZS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation