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AT1G12330


Description : unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 14; Plants - 217; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).


Gene families : OG0004046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00096700 evm_27.TU.AmTr_v1... IRK-interacting protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g06602 GIL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g14500.1 LOC_Os03g14500 IRK-interacting protein OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os09g31370.1 LOC_Os09g31370 IRK-interacting protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_9461665g0010 No alias IRK-interacting protein OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Msp_g18680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009431 No alias not classified & original description: CDS=1-3288 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010207 No alias not classified & original description: CDS=648-3506 0.03 OrthoFinder output from all 47 species
Solyc08g079510.3.1 Solyc08g079510 IRK-interacting protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e001041_P001 Zm00001e001041 IRK-interacting protein OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e024380_P001 Zm00001e024380 IRK-interacting protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006949 syncytium formation IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0008219 cell death IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009913 epidermal cell differentiation IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0030855 epithelial cell differentiation IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045595 regulation of cell differentiation IEP HCCA
BP GO:0045596 negative regulation of cell differentiation IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048497 maintenance of floral organ identity IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0090700 maintenance of plant organ identity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA

No InterPro domains available for this sequence

No external refs found!