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AT1G12070


Description : Immunoglobulin E-set superfamily protein


Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G12070
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00173830 SCN1,... Multi-process regulation.Rop GTPase regulatory... 0.05 OrthoFinder output from all 47 species
AT3G07880 SCN1 Immunoglobulin E-set superfamily protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene23920.t1 SCN1, Aspi01Gene23920 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Dac_g24741 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Dcu_g06230 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68540.1 SCN1, LOC_Os01g68540 guanine nucleotide dissociation inhibitor (RopGDI) 0.07 OrthoFinder output from all 47 species
LOC_Os02g48730.1 SCN1, LOC_Os02g48730 guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species
MA_133119g0010 SCN1 guanine nucleotide dissociation inhibitor (RopGDI) 0.01 OrthoFinder output from all 47 species
Solyc05g054110.3.1 SCN1, Solyc05g054110 guanine nucleotide dissociation inhibitor (RopGDI) 0.04 OrthoFinder output from all 47 species
Tin_g03149 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Zm00001e027138_P001 SCN1, Zm00001e027138 guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species
Zm00001e027139_P001 SCN1, Zm00001e027139 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Zm00001e031533_P001 SCN1, Zm00001e031533 guanine nucleotide dissociation inhibitor (RopGDI) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity ISS Interproscan
CC GO:0005737 cytoplasm ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007015 actin filament organization RCA Interproscan
BP GO:0009827 plant-type cell wall modification RCA Interproscan
BP GO:0009860 pollen tube growth RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005451 obsolete monoatomic cation:proton antiporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005884 actin filament IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030036 actin cytoskeleton organization IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
CC GO:0030427 site of polarized growth IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035725 sodium ion transmembrane transport IEP HCCA
CC GO:0035838 growing cell tip IEP HCCA
CC GO:0045177 apical part of cell IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
CC GO:0051286 cell tip IEP HCCA
CC GO:0060187 cell pole IEP HCCA
CC GO:0070382 exocytic vesicle IEP HCCA
BP GO:0080092 regulation of pollen tube growth IEP HCCA
CC GO:0090404 pollen tube tip IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099503 secretory vesicle IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000406 Rho_GDI 35 221
No external refs found!