AT1G10800

Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

Gene families : OG0006681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006681_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G10800
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
Adi_g000496	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g41414	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25204	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g01643	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g02436	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc09g098115.1.1	Solyc09g098115	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Tin_g20421	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010089	xylem development	RCA	Interproscan
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
MF	GO:0031176	endo-1,4-beta-xylanase activity	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
MF	GO:0097599	xylanase activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G10800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation