AT1G08560 (SYP111, ATSYP111, KN)

Aliases : SYP111, ATSYP111, KN

Description : syntaxin of plants 111

Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G08560
Cluster	HCCA: Cluster_136

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00039700	SYP111,...	Vesicle trafficking.SNARE target membrane recognition...	0.03	OrthoFinder output from all 47 species
AMTR_s00103p00119740	SYP111,...	Vesicle trafficking.SNARE target membrane recognition...	0.04	OrthoFinder output from all 47 species
Als_g02865	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Aop_g01106	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.06	OrthoFinder output from all 47 species
Aspi01Gene35684.t1	ATSYP124,...	Qa-type SYP1-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Azfi_s0059.g034575	SYP132, ATSYP132	Qa-type SYP1-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Ceric.09G096900.1	SYP125,...	Qa-type SYP1-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Ceric.17G026900.1	ATSYP124,...	Qa-type SYP1-group component of SNARE membrane fusion...	0.06	OrthoFinder output from all 47 species
Dac_g15957	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.05	OrthoFinder output from all 47 species
Dcu_g14231	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
GSVIVT01030607001	SYP132, ATSYP132	Vesicle trafficking.SNARE target membrane recognition...	0.03	OrthoFinder output from all 47 species
GSVIVT01035559001	SYP111, ATSYP111, KN	Vesicle trafficking.SNARE target membrane recognition...	0.08	OrthoFinder output from all 47 species
LOC_Os03g52650.1	SYP111,...	Qa-SNARE component KNOLLE of SNARE cell-plate vesicle...	0.09	OrthoFinder output from all 47 species
Lfl_g23596	SYP125, ATSYP125	Qa-type SYP1-group component of SNARE membrane fusion...	0.06	OrthoFinder output from all 47 species
Mp2g19600.1	SYP132, ATSYP132	SYP1-group Qa-type SNARE component	0.02	OrthoFinder output from all 47 species
Msp_g10266	SYP125, ATSYP125	Qa-type SYP1-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Msp_g11528	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.05	OrthoFinder output from all 47 species
Nbi_g04089	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.05	OrthoFinder output from all 47 species
Ore_g43138	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Ppi_g20351	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016734	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024205	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
Smo130326	ATSYP124, SYP124	Vesicle trafficking.SNARE target membrane recognition...	0.02	OrthoFinder output from all 47 species
Solyc01g006950.3.1	SYP121,...	SYP1-group Qa-type SNARE component	0.03	OrthoFinder output from all 47 species
Solyc06g053760.3.1	SYP111,...	Qa-SNARE component KNOLLE of SNARE cell-plate vesicle...	0.06	OrthoFinder output from all 47 species
Spa_g06782	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.05	OrthoFinder output from all 47 species
Zm00001e012082_P001	SYP111,...	Qa-SNARE component KNOLLE of SNARE cell-plate vesicle...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005484	SNAP receptor activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006084	acetyl-CoA metabolic process	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006637	acyl-CoA metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	TAS	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007051	spindle organization	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008283	cell population proliferation	RCA	Interproscan
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
CC	GO:0009504	cell plate	IDA	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009524	phragmoplast	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010583	response to cyclopentenone	IEP	Interproscan
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
CC	GO:0012505	endomembrane system	IDA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0016192	vesicle-mediated transport	RCA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0030054	cell junction	None	Extended
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035383	thioester metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051225	spindle assembly	RCA	Interproscan
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000280	nuclear division	IEP	HCCA
MF	GO:0004076	biotin synthase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005819	spindle	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006768	biotin metabolic process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0008710	8-amino-7-oxononanoate synthase activity	IEP	HCCA
BP	GO:0009102	biotin biosynthetic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009624	response to nematode	IEP	HCCA
BP	GO:0009652	thigmotropism	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0010440	stomatal lineage progression	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
BP	GO:0016572	obsolete histone phosphorylation	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
MF	GO:0016783	sulfurtransferase activity	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
CC	GO:0046658	obsolete anchored component of plasma membrane	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048653	anther development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0061062	regulation of nematode larval development	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000727	T_SNARE_dom	248	300
IPR006011	Syntaxin_N	45	247

External Links

No external refs found!

AT1G08560 (SYP111, ATSYP111, KN)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation