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  5. AT1G07790

AT1G07790 (HTB1)


Aliases : HTB1

Description : Histone superfamily protein


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G07790
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00085300 HTB4,... Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from all 47 species
AMTR_s00012p00085960 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00088340 HTB4,... Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
AMTR_s00085p00145460 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Adi_g004775 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g019244 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021198 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g032961 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g068717 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086613 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102459 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128631 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24593 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27849 HTB4 histone *(H2B) & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g34176 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38274 HTB4 histone *(H2B) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene17102.t1 HTB4, Aspi01Gene17102 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene27518.t1 HTB4, Aspi01Gene27518 histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27522.t1 HTB4, Aspi01Gene27522 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G007900.1 HTB4, Ceric.03G007900 histone *(H2B) & original description: pacid=50571513... 0.04 OrthoFinder output from all 47 species
Ceric.04G053600.1 HTB4, Ceric.04G053600 histone *(H2B) & original description: pacid=50631349... 0.03 OrthoFinder output from all 47 species
Ceric.06G011800.1 HTB4, Ceric.06G011800 histone *(H2B) & original description: pacid=50619795... 0.04 OrthoFinder output from all 47 species
Ceric.12G022100.1 HTB4, Ceric.12G022100 histone *(H2B) & original description: pacid=50601168... 0.03 OrthoFinder output from all 47 species
Ceric.12G022200.1 HTB4, Ceric.12G022200 histone *(H2B) & original description: pacid=50601405... 0.03 OrthoFinder output from all 47 species
Ceric.18G011100.1 HTB4, Ceric.18G011100 histone *(H2B) & original description: pacid=50622059... 0.01 OrthoFinder output from all 47 species
Ceric.20G039500.1 HTB4, Ceric.20G039500 histone *(H2B) & original description: pacid=50566293... 0.05 OrthoFinder output from all 47 species
Ceric.24G053000.1 HTB4, Ceric.24G053000 histone *(H2B) & original description: pacid=50628469... 0.03 OrthoFinder output from all 47 species
Ceric.24G053100.1 HTB4, Ceric.24G053100 histone *(H2B) & original description: pacid=50628870... 0.05 OrthoFinder output from all 47 species
Ceric.27G026200.1 Ceric.27G026200 histone *(H2B) & original description: pacid=50606193... 0.01 OrthoFinder output from all 47 species
Ceric.27G028800.1 HTB4, Ceric.27G028800 histone *(H2B) & original description: pacid=50605139... 0.01 OrthoFinder output from all 47 species
Ceric.27G029200.1 Ceric.27G029200 histone *(H2B) & original description: pacid=50606171... 0.04 OrthoFinder output from all 47 species
Ceric.29G085800.1 HTB4, Ceric.29G085800 histone *(H2B) & original description: pacid=50624560... 0.04 OrthoFinder output from all 47 species
Ceric.29G085900.1 HTB4, Ceric.29G085900 histone *(H2B) & original description: pacid=50624351... 0.04 OrthoFinder output from all 47 species
Ceric.35G052700.1 HTB4, Ceric.35G052700 histone *(H2B) & original description: pacid=50581244... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g264800 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g264900 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g266750 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g271376 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g273850 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g274250 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g275800 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre06.g276550 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre06.g276900 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504550 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504700 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre12.g505600 HTB4 Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506200 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre13.g570050 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g709150 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g710450 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g711750 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Cre17.g713450 HTB4 Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
Cre17.g714050 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Dac_g01811 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17045 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06359 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14460 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from all 47 species
GSVIVT01025021001 No alias Chromatin organisation.histones.H2B-type histone 0.05 OrthoFinder output from all 47 species
GSVIVT01025025001 No alias Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from all 47 species
Gb_02245 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Gb_12082 No alias histone (H2B) 0.06 OrthoFinder output from all 47 species
Gb_12096 No alias histone (H2B) 0.09 OrthoFinder output from all 47 species
Gb_26315 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Gb_32754 HTB11 histone (H2B) 0.07 OrthoFinder output from all 47 species
Gb_41508 HTB4 histone (H2B) 0.04 OrthoFinder output from all 47 species
LOC_Os01g05610.1 HTB11, LOC_Os01g05610 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os01g05900.1 HTB11, LOC_Os01g05900 histone (H2B) 0.05 OrthoFinder output from all 47 species
LOC_Os01g05970.1 HTB11, LOC_Os01g05970 histone (H2B) 0.04 OrthoFinder output from all 47 species
LOC_Os01g06010.1 HTB11, LOC_Os01g06010 histone (H2B) 0.06 OrthoFinder output from all 47 species
LOC_Os01g62230.1 LOC_Os01g62230 histone (H2B) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49860.1 HTB11, LOC_Os05g49860 histone (H2B) 0.04 OrthoFinder output from all 47 species
LOC_Os08g38300.1 HTB11, LOC_Os08g38300 histone (H2B) 0.08 OrthoFinder output from all 47 species
Len_g04914 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g06996 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13876 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428006g0010 HTB11 histone (H2B) 0.01 OrthoFinder output from all 47 species
MA_10435143g0010 No alias histone (H2B) 0.04 OrthoFinder output from all 47 species
MA_10436516g0010 HTB11 histone (H2B) 0.04 OrthoFinder output from all 47 species
MA_10436516g0020 HTB11 histone (H2B) 0.05 OrthoFinder output from all 47 species
MA_38565g0010 No alias histone (H2B) 0.03 OrthoFinder output from all 47 species
MA_6078786g0010 HTB11 histone (H2B) 0.06 OrthoFinder output from all 47 species
MA_8065g0010 HTB11 histone (H2B) 0.04 OrthoFinder output from all 47 species
MA_9293473g0010 HTB11 histone (H2B) 0.03 OrthoFinder output from all 47 species
Mp4g13450.1 HTB11 histone (H2B) 0.04 OrthoFinder output from all 47 species
Mp6g04070.1 No alias histone (H2B) 0.03 OrthoFinder output from all 47 species
Pir_g31996 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_7610V3.1 HTB4, Pp3c12_7610 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c13_23540V3.1 HTB1, Pp3c13_23540 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Pp3c14_21050V3.1 HTB4, Pp3c14_21050 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Pp3c17_15750V3.1 HTB4, Pp3c17_15750 Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Pp3c6_27740V3.1 HTB4, Pp3c6_27740 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g60087 HTB4 histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37867 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Smo182308 HTB4 Chromatin organisation.histones.H2B-type histone 0.04 OrthoFinder output from all 47 species
Solyc02g038690.1.1 HTB4, Solyc02g038690 histone (H2B) 0.07 OrthoFinder output from all 47 species
Solyc03g071620.2.1 Solyc03g071620 histone (H2B) 0.04 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.06 OrthoFinder output from all 47 species
Solyc06g074780.1.1 HTB4, Solyc06g074780 histone (H2B) 0.03 OrthoFinder output from all 47 species
Solyc06g074790.2.1 HTB11, Solyc06g074790 histone (H2B) 0.04 OrthoFinder output from all 47 species
Solyc06g075800.1.1 HTB11, Solyc06g075800 histone (H2B) 0.12 OrthoFinder output from all 47 species
Solyc11g007920.1.1 HTB11, Solyc11g007920 histone (H2B) 0.08 OrthoFinder output from all 47 species
Solyc11g007930.1.1 HTB11, Solyc11g007930 histone (H2B) 0.07 OrthoFinder output from all 47 species
Solyc11g066430.2.1 Solyc11g066430 histone (H2B) 0.07 OrthoFinder output from all 47 species
Solyc12g013510.1.1 HTB11, Solyc12g013510 histone (H2B) 0.02 OrthoFinder output from all 47 species
Spa_g01863 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10969 No alias histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g13989 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g32990 HTB4 histone *(H2B) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g45813 HTB4 histone *(H2B) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g46015 HTB4 histone *(H2B) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g46425 No alias histone *(H2B) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50701 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52507 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52508 No alias histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05754 No alias histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09273 No alias histone *(H2B) & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e004028_P001 HTB11, Zm00001e004028 histone (H2B) 0.07 OrthoFinder output from all 47 species
Zm00001e009857_P001 HTB11, Zm00001e009857 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e016882_P001 HTB2, H2B, Zm00001e016882 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e019346_P001 HTB4, Zm00001e019346 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e020484_P002 HTB1, Zm00001e020484 histone (H2B) 0.09 OrthoFinder output from all 47 species
Zm00001e022201_P001 HTB11, Zm00001e022201 histone (H2B) 0.09 OrthoFinder output from all 47 species
Zm00001e023342_P001 HTB4, Zm00001e023342 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e027803_P001 HTB11, Zm00001e027803 histone (H2B) 0.04 OrthoFinder output from all 47 species
Zm00001e034226_P001 HTB11, Zm00001e034226 histone (H2B) 0.05 OrthoFinder output from all 47 species
Zm00001e038466_P001 HTB1, Zm00001e038466 histone (H2B) 0.03 OrthoFinder output from all 47 species
Zm00001e039057_P002 HTB11, Zm00001e039057 histone (H2B) 0.1 OrthoFinder output from all 47 species
Zm00001e041296_P001 HTB11, Zm00001e041296 histone (H2B) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006261 DNA-templated DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006279 premeiotic DNA replication IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030337 DNA polymerase processivity factor activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0033260 nuclear DNA replication IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035173 histone kinase activity IEP HCCA
MF GO:0035184 histone threonine kinase activity IEP HCCA
MF GO:0035402 histone H3T11 kinase activity IEP HCCA
BP GO:0035407 obsolete histone H3-T11 phosphorylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048451 petal formation IEP HCCA
BP GO:0048453 sepal formation IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0072354 histone H3T3 kinase activity IEP HCCA
BP GO:0072355 obsolete histone H3-T3 phosphorylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 6 124
No external refs found!