AT1G06210

Description : ENTH/VHS/GAT family protein

Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G06210
Cluster	HCCA: Cluster_97

Target	Alias	Description	ECC score	Gene Family Method
Adi_g055239	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10029	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene18366.t1	Aspi01Gene18366	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g17236	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g01385	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g06559	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000824	No alias	ubiquitin adaptor protein *(TOL) & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g15242	No alias	ubiquitin adaptor protein *(TOL) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g02281	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005795	Golgi stack	ISS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISS	Interproscan
BP	GO:0006891	intra-Golgi vesicle-mediated transport	ISS	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008565	obsolete protein transporter activity	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048193	Golgi vesicle transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
MF	GO:0008327	methyl-CpG binding	IEP	HCCA
MF	GO:0019003	GDP binding	IEP	HCCA
BP	GO:0030148	sphingolipid biosynthetic process	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0046467	membrane lipid biosynthetic process	IEP	HCCA
BP	GO:0046519	sphingoid metabolic process	IEP	HCCA
BP	GO:0046520	sphingoid biosynthetic process	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004152	GAT_dom	236	306
IPR002014	VHS_dom	39	148

External Links

No external refs found!