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AT1G05970


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG0004196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G05970
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Als_g03613 No alias component *(AIPP1) of ASI1-AIPP1-EDM2 chromatin... 0.02 OrthoFinder output from all 47 species
Nbi_g07454 No alias component *(AIPP1) of ASI1-AIPP1-EDM2 chromatin... 0.02 OrthoFinder output from all 47 species
Sam_g19003 No alias component *(AIPP1) of ASI1-AIPP1-EDM2 chromatin... 0.02 OrthoFinder output from all 47 species
Solyc10g079580.2.1 Solyc10g079580 chromatin-associated epigenetic factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005811 lipid droplet IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0008022 protein C-terminus binding IEP HCCA
MF GO:0008970 phospholipase A1 activity IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0019005 SCF ubiquitin ligase complex IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
MF GO:0047714 galactolipase activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!