AT1G04500

Description : CCT motif family protein

Gene families : OG0001446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001446_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G04500

Target	Alias	Description	ECC score	Gene Family Method
AT1G63820	No alias	CCT motif family protein	0.02	OrthoFinder output from all 47 species
Als_g19257	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os03g04620.1	LOC_Os03g04620	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
LOC_Os10g32900.1	LOC_Os10g32900	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Lfl_g17850	No alias	CMF transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Mp1g16040.1	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc09g090650.3.1	Solyc09g090650	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e004626_P002	Zm00001e004626	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e012722_P001	Zm00001e012722	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0005451	obsolete monoatomic cation:proton antiporter activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0006814	sodium ion transport	IEP	HCCA
BP	GO:0008219	cell death	IEP	HCCA
BP	GO:0010351	lithium ion transport	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015081	sodium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0015385	sodium:proton antiporter activity	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0035725	sodium ion transmembrane transport	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
MF	GO:0051139	metal cation:proton antiporter activity	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
MF	GO:0140828	metal cation:monoatomic cation antiporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010402	CCT_domain	288	330

External Links

No external refs found!

AT1G04500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation