AT1G04040

Description : HAD superfamily, subfamily IIIB acid phosphatase

Gene families : OG0000371 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000371_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G04040
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00067p00205850	evm_27.TU.AmTr_v1...	Acid phosphatase 1 OS=Solanum lycopersicum	0.03	OrthoFinder output from all 47 species
AMTR_s00077p00160000	evm_27.TU.AmTr_v1...	Acid phosphatase 1 OS=Solanum lycopersicum	0.03	OrthoFinder output from all 47 species
AT2G38600	No alias	HAD superfamily, subfamily IIIB acid phosphatase	0.06	OrthoFinder output from all 47 species
AT4G29270	No alias	HAD superfamily, subfamily IIIB acid phosphatase	0.05	OrthoFinder output from all 47 species
AT5G24770	VSP2, ATVSP2	vegetative storage protein 2	0.06	OrthoFinder output from all 47 species
AT5G24780	ATVSP1, VSP1	vegetative storage protein 1	0.06	OrthoFinder output from all 47 species
Adi_g006553	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g04530	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g06959	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g30772	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g38154	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g01346	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g24523	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene11599.t1	Aspi01Gene11599	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene22301.t1	Aspi01Gene22301	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene71247.t1	Aspi01Gene71247	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g09736	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g08540	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g05276	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g19881	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01016112001	No alias	Acid phosphatase 1 OS=Solanum lycopersicum	0.02	OrthoFinder output from all 47 species
GSVIVT01029880001	No alias	Acid phosphatase 1 OS=Solanum lycopersicum	0.06	OrthoFinder output from all 47 species
Gb_13212	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.06	OrthoFinder output from all 47 species
Gb_19056	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
Gb_34529	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Gb_35615	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os05g09704.1	LOC_Os05g09704	Acid phosphatase 1 OS=Solanum lycopersicum...	0.05	OrthoFinder output from all 47 species
LOC_Os05g09724.1	LOC_Os05g09724	Acid phosphatase 1 OS=Solanum lycopersicum...	0.06	OrthoFinder output from all 47 species
LOC_Os05g09740.1	LOC_Os05g09740	Acid phosphatase 1 OS=Solanum lycopersicum...	0.05	OrthoFinder output from all 47 species
LOC_Os05g10210.1	LOC_Os05g10210	Acid phosphatase 1 OS=Solanum lycopersicum...	0.05	OrthoFinder output from all 47 species
LOC_Os05g10310.1	LOC_Os05g10310	Acid phosphatase 1 OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
LOC_Os05g10370.1	LOC_Os05g10370	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os07g48320.1	LOC_Os07g48320	Acid phosphatase 1 OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
MA_131674g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
MA_177384g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_187459g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
MA_205961g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
MA_6900320g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
MA_948726g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Mp2g01450.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.02	OrthoFinder output from all 47 species
Mp6g14170.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Msp_g18736	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g30142	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g37420	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g43776	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g09429	No alias	acid phosphatase storage protein & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g28170	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005754	No alias	acid phosphatase storage protein & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019920	No alias	acid phosphatase storage protein & original description:...	0.03	OrthoFinder output from all 47 species
Smo404652	No alias	No description available	0.03	OrthoFinder output from all 47 species
Smo80522	No alias	Acid phosphatase 1 OS=Solanum lycopersicum	0.04	OrthoFinder output from all 47 species
Solyc03g121100.4.1	Solyc03g121100	Acid phosphatase 1 OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Solyc06g062380.3.1	Solyc06g062380	Acid phosphatase 1 OS=Solanum lycopersicum...	0.07	OrthoFinder output from all 47 species
Solyc09g090600.3.1	Solyc09g090600	Acid phosphatase 1 OS=Solanum lycopersicum...	0.08	OrthoFinder output from all 47 species
Spa_g16331	No alias	acid phosphatase storage protein & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g24351	No alias	acid phosphatase storage protein & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001564_P002	Zm00001e001564	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species
Zm00001e027124_P001	Zm00001e027124	Acid phosphatase 1 OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species
Zm00001e031215_P001	Zm00001e031215	Stem 28 kDa glycoprotein OS=Glycine max...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	RCA	Interproscan
BP	GO:0000902	cell morphogenesis	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003993	acid phosphatase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009505	plant-type cell wall	IDA	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009825	multidimensional cell growth	RCA	Interproscan
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009832	plant-type cell wall biogenesis	RCA	Interproscan
BP	GO:0009932	cell tip growth	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010817	regulation of hormone levels	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030243	cellulose metabolic process	RCA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043473	pigmentation	None	Extended
BP	GO:0043476	pigment accumulation	None	Extended
BP	GO:0043478	pigment accumulation in response to UV light	None	Extended
BP	GO:0043479	pigment accumulation in tissues in response to UV light	None	Extended
BP	GO:0043480	pigment accumulation in tissues	None	Extended
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	RCA	Interproscan
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048767	root hair elongation	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0004737	pyruvate decarboxylase activity	IEP	HCCA
MF	GO:0004806	triglyceride lipase activity	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0010359	regulation of anion channel activity	IEP	HCCA
MF	GO:0015105	arsenite transmembrane transporter activity	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015700	arsenite transport	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	HCCA
BP	GO:0032409	regulation of transporter activity	IEP	HCCA
BP	GO:0032412	regulation of monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
BP	GO:0044070	regulation of monoatomic anion transport	IEP	HCCA
BP	GO:0046685	response to arsenic-containing substance	IEP	HCCA
BP	GO:1903959	regulation of monoatomic anion transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005519	Acid_phosphat_B-like	45	270

External Links

No external refs found!

AT1G04040

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation