AT1G03130 (PSAD-2)

Aliases : PSAD-2

Description : photosystem I subunit D-2

Gene families : OG0005029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005029_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G03130
Cluster	HCCA: Cluster_83

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00103p00041210	PSAD-1,...	Photosynthesis.photophosphorylation.photosystem I.PS-I...	0.18	OrthoFinder output from all 47 species
Adi_g025142	PSAD-2	component *(PsaD) of PS-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Adi_g043962	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Adi_g087954	PSAD-2	component *(PsaD) of PS-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Aev_g40416	PSAD-2	component *(PsaD) of PS-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Ala_g08260	PSAD-2	component *(PsaD) of PS-I complex & original description: none	0.21	OrthoFinder output from all 47 species
Als_g06974	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.15	OrthoFinder output from all 47 species
Als_g11619	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Aob_g25344	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12165	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene41992.t1	PSAD-1, Aspi01Gene41992	component *(PsaD) of PS-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Azfi_s0529.g075797	PSAD-2	component *(PsaD) of PS-I complex & original...	0.05	OrthoFinder output from all 47 species
Cba_g07831	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.14G082100.1	PSAD-1, Ceric.14G082100	component *(PsaD) of PS-I complex & original...	0.14	OrthoFinder output from all 47 species
Ceric.38G011300.1	PSAD-1, Ceric.38G011300	component *(PsaD) of PS-I complex & original...	0.24	OrthoFinder output from all 47 species
Cre05.g238332	PSAD-1	Photosynthesis.photophosphorylation.photosystem I.PS-I...	0.22	OrthoFinder output from all 47 species
Dac_g16111	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.17	OrthoFinder output from all 47 species
Dac_g26018	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.2	OrthoFinder output from all 47 species
Dcu_g24887	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Dcu_g27430	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.27	OrthoFinder output from all 47 species
Dde_g00340	PSAD-2	component *(PsaD) of PS-I complex & original description: none	0.12	OrthoFinder output from all 47 species
GSVIVT01001159001	PSAD-2	Photosynthesis.photophosphorylation.photosystem I.PS-I...	0.06	OrthoFinder output from all 47 species
GSVIVT01017944001	PSAD-1	Photosynthesis.photophosphorylation.photosystem I.PS-I...	0.13	OrthoFinder output from all 47 species
Gb_20120	PSAD-2	component PsaD of PS-I complex	0.22	OrthoFinder output from all 47 species
Len_g06237	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Len_g17874	PSAD-2	component *(PsaD) of PS-I complex & original description: none	0.04	OrthoFinder output from all 47 species
MA_9169733g0010	PSAD-1	component PsaD of PS-I complex	0.19	OrthoFinder output from all 47 species
Mp5g04200.1	PSAD-1	component PsaD of PS-I complex	0.26	OrthoFinder output from all 47 species
Msp_g25846	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.09	OrthoFinder output from all 47 species
Nbi_g06591	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Pir_g07013	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Pnu_g19078	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.08	OrthoFinder output from all 47 species
Pp3c3_5620V3.1	PSAD-2, Pp3c3_5620	photosystem I subunit D-2	0.11	OrthoFinder output from all 47 species
Ppi_g30439	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010842	PSAD-2	component *(PsaD) of PS-I complex & original...	0.06	OrthoFinder output from all 47 species
Solyc06g054260.1.1	PSAD-2, Solyc06g054260	component PsaD of PS-I complex	0.26	OrthoFinder output from all 47 species
Spa_g10017	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.16	OrthoFinder output from all 47 species
Spa_g16378	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.14	OrthoFinder output from all 47 species
Spa_g22425	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.12	OrthoFinder output from all 47 species
Spa_g56021	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.13	OrthoFinder output from all 47 species
Tin_g15526	PSAD-1	component *(PsaD) of PS-I complex & original description: none	0.11	OrthoFinder output from all 47 species
Zm00001e011821_P001	PSAD-1, Zm00001e011821	component PsaD of PS-I complex	0.24	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009538	photosystem I reaction center	ISS	Interproscan
CC	GO:0009579	thylakoid	IDA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	ISS	Interproscan
BP	GO:0015979	photosynthesis	RCA	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0019725	cellular homeostasis	None	Extended
CC	GO:0019867	outer membrane	None	Extended
BP	GO:0030003	cellular monoatomic cation homeostasis	RCA	Interproscan
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0035303	regulation of dephosphorylation	None	Extended
BP	GO:0035304	regulation of protein dephosphorylation	RCA	Interproscan
CC	GO:0042170	plastid membrane	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000097	sulfur amino acid biosynthetic process	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006098	pentose-phosphate shunt	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006534	cysteine metabolic process	IEP	HCCA
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006739	NADP metabolic process	IEP	HCCA
BP	GO:0006740	NADPH regeneration	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009070	serine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
CC	GO:0009503	thylakoid light-harvesting complex	IEP	HCCA
CC	GO:0009517	PSII associated light-harvesting complex II	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
CC	GO:0009533	chloroplast stromal thylakoid	IEP	HCCA
CC	GO:0009543	chloroplast thylakoid lumen	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009639	response to red or far red light	IEP	HCCA
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009644	response to high light intensity	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009657	plastid organization	IEP	HCCA
CC	GO:0009706	chloroplast inner membrane	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009765	photosynthesis, light harvesting	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009768	photosynthesis, light harvesting in photosystem I	IEP	HCCA
BP	GO:0009773	photosynthetic electron transport in photosystem I	IEP	HCCA
CC	GO:0009783	photosystem II antenna complex	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010114	response to red light	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010196	nonphotochemical quenching	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
CC	GO:0010287	plastoglobule	IEP	HCCA
MF	GO:0015036	disulfide oxidoreductase activity	IEP	HCCA
MF	GO:0015038	glutathione disulfide oxidoreductase activity	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016168	chlorophyll binding	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
BP	GO:0017014	protein nitrosylation	IEP	HCCA
BP	GO:0018119	peptidyl-cysteine S-nitrosylation	IEP	HCCA
BP	GO:0018198	peptidyl-cysteine modification	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019344	cysteine biosynthetic process	IEP	HCCA
BP	GO:0019362	pyridine nucleotide metabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0030076	light-harvesting complex	IEP	HCCA
CC	GO:0030093	chloroplast photosystem I	IEP	HCCA
CC	GO:0030095	chloroplast photosystem II	IEP	HCCA
BP	GO:0031407	oxylipin metabolic process	IEP	HCCA
BP	GO:0031408	oxylipin biosynthetic process	IEP	HCCA
CC	GO:0031977	thylakoid lumen	IEP	HCCA
CC	GO:0031978	plastid thylakoid lumen	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0046496	nicotinamide nucleotide metabolic process	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
MF	GO:0048529	magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	IEP	HCCA
BP	GO:0048653	anther development	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0051156	glucose 6-phosphate metabolic process	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0072524	pyridine-containing compound metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0098807	chloroplast thylakoid membrane protein complex	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901401	regulation of tetrapyrrole metabolic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:1990066	energy quenching	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003685	PsaD	72	202

External Links

No external refs found!

AT1G03130 (PSAD-2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation